Gene : Glyma.18G081400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31791:SF13 - FRIGIDA-LIKE PROTEIN 5 Genomic Order:  814
Name:  ? Glyma.18G081400 Secondary Identifier:  ? PAC:30556493
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G081400 0.5kb upstream 0.5kb upstream 4790 true Chr18: 7855715-7860504 Glycine max
Glyma.18G081400 0.5kb upstream 0.5kb upstream 500 false Chr18: 7860005-7860504 Glycine max
Glyma.18G081400 0.5kb downstream 0.5kb downstream 4790 true Chr18: 7855215-7860004 Glycine max
Glyma.18G081400 0.5kb downstream 0.5kb downstream 500 false Chr18: 7855215-7855714 Glycine max
Glyma.18G081400 1.0kb upstream 1.0kb upstream 5290 true Chr18: 7855715-7861004 Glycine max
Glyma.18G081400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 7860005-7861004 Glycine max
Glyma.18G081400 1.0kb downstream 1.0kb downstream 5290 true Chr18: 7854715-7860004 Glycine max
Glyma.18G081400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 7854715-7855714 Glycine max
Glyma.18G081400 2.0kb upstream 2.0kb upstream 6290 true Chr18: 7855715-7862004 Glycine max
Glyma.18G081400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 7860005-7862004 Glycine max
Glyma.18G081400 2.0kb downstream 2.0kb downstream 6290 true Chr18: 7853715-7860004 Glycine max
Glyma.18G081400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 7853715-7855714 Glycine max
Glyma.18G081400 5.0kb upstream 5.0kb upstream 9290 true Chr18: 7855715-7865004 Glycine max
Glyma.18G081400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 7860005-7865004 Glycine max
Glyma.18G081400 5.0kb downstream 5.0kb downstream 9290 true Chr18: 7850715-7860004 Glycine max
Glyma.18G081400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 7850715-7855714 Glycine max
Glyma.18G081400 10.0kb upstream 10.0kb upstream 14290 true Chr18: 7855715-7870004 Glycine max
Glyma.18G081400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 7860005-7870004 Glycine max
Glyma.18G081400 10.0kb downstream 10.0kb downstream 14290 true Chr18: 7845715-7860004 Glycine max
Glyma.18G081400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 7845715-7855714 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313510 5265 Fabidae View MSA
124072897 5270 Rosid View MSA
123741015 5271 Pentapetalae View MSA
122795482 5272 Eudicot View MSA
122048785 5273 Angiosperm View MSA
121311111 5274 Embryophyte View MSA
123348454 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.95228 0.0 16.8301    
cufflinks 6.19561 0.0 23.4158   High
cufflinks 4.88286 0.0 20.1046    
cufflinks 5.54453 0.0 21.4787    
cufflinks 3.65534 0.0 16.142    
cufflinks 3.31868 0.0 12.5663   Low
cufflinks 5.77116 0.0 22.0431   High
cufflinks 4.52577 0.0 18.5509    
cufflinks 3.38151 0.0 15.2272   Low
cufflinks 0.651        
cufflinks 0.554        
cufflinks 0.891        
cufflinks 0.573        
cufflinks 0.665        
cufflinks 0.552        
cufflinks 0.951        
cufflinks 0.557        
cufflinks 0.925        
cufflinks 1.292       High
cufflinks 0.868        
cufflinks 0.479       Low
cufflinks 0.904        
cufflinks 0.854        
cufflinks 0.656        
cufflinks 0.838        
cufflinks 0.45       Low

0 Strain