Gene : Glyma.18G062000 G. max Wm82.a2.v1
Defline:  (1 of 12) PF11960 - Domain of unknown function (DUF3474) (DUF3474) Genomic Order:  620
Name:  ? Glyma.18G062000 Secondary Identifier:  ? PAC:30555267
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G062000 0.5kb upstream 0.5kb upstream 3336 true Chr18: 5646002-5649337 Glycine max
Glyma.18G062000 0.5kb upstream 0.5kb upstream 500 false Chr18: 5646002-5646501 Glycine max
Glyma.18G062000 0.5kb downstream 0.5kb downstream 3336 true Chr18: 5646502-5649837 Glycine max
Glyma.18G062000 0.5kb downstream 0.5kb downstream 500 false Chr18: 5649338-5649837 Glycine max
Glyma.18G062000 1.0kb upstream 1.0kb upstream 3836 true Chr18: 5645502-5649337 Glycine max
Glyma.18G062000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 5645502-5646501 Glycine max
Glyma.18G062000 1.0kb downstream 1.0kb downstream 3836 true Chr18: 5646502-5650337 Glycine max
Glyma.18G062000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 5649338-5650337 Glycine max
Glyma.18G062000 2.0kb upstream 2.0kb upstream 4836 true Chr18: 5644502-5649337 Glycine max
Glyma.18G062000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 5644502-5646501 Glycine max
Glyma.18G062000 2.0kb downstream 2.0kb downstream 4836 true Chr18: 5646502-5651337 Glycine max
Glyma.18G062000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 5649338-5651337 Glycine max
Glyma.18G062000 5.0kb upstream 5.0kb upstream 7836 true Chr18: 5641502-5649337 Glycine max
Glyma.18G062000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 5641502-5646501 Glycine max
Glyma.18G062000 5.0kb downstream 5.0kb downstream 7836 true Chr18: 5646502-5654337 Glycine max
Glyma.18G062000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 5649338-5654337 Glycine max
Glyma.18G062000 10.0kb upstream 10.0kb upstream 12836 true Chr18: 5636502-5649337 Glycine max
Glyma.18G062000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 5636502-5646501 Glycine max
Glyma.18G062000 10.0kb downstream 10.0kb downstream 12836 true Chr18: 5646502-5659337 Glycine max
Glyma.18G062000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 5649338-5659337 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313577 5265 Fabidae View MSA
124072004 5270 Rosid View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.58786 0.0 28.5381    
cufflinks 17.4605 0.0 74.9819    
cufflinks 34.5845 0.0 147.087 High High
cufflinks 10.5659 0.0 51.003    
cufflinks 8.22608 0.0 43.1157    
cufflinks 2.75634 0.0 10.0165   Low
cufflinks 49.2754 0.0 221.9 High High
cufflinks 9.42939 0.0 38.1302    
cufflinks 3.79195 0.0 17.7667   Low
cufflinks 7.738     High  
cufflinks 0.017     Low Low
cufflinks 8.324     High  
cufflinks 2.118        
cufflinks 3.418        
cufflinks 0.003     Low Low
cufflinks 4.047        
cufflinks 0.14        
cufflinks 10.524     High  
cufflinks 4.582        
cufflinks 2.536        
cufflinks 0.049     Low Low
cufflinks 4.261        
cufflinks 9.047     High  
cufflinks 0.036     Low Low
cufflinks 4.298        
cufflinks 0.11        

0 Strain