Gene : Glyma.18G064200 G. max Wm82.a2.v1
Defline:  (1 of 6) 3.1.4.3 - Phospholipase C / Lipophosphodiesterase I Genomic Order:  642
Name:  ? Glyma.18G064200 Secondary Identifier:  ? PAC:30555932
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPASYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G064200 0.5kb upstream 0.5kb upstream 1629 true Chr18: 5863321-5864949 Glycine max
Glyma.18G064200 0.5kb upstream 0.5kb upstream 500 false Chr18: 5864450-5864949 Glycine max
Glyma.18G064200 0.5kb downstream 0.5kb downstream 1629 true Chr18: 5862821-5864449 Glycine max
Glyma.18G064200 0.5kb downstream 0.5kb downstream 500 false Chr18: 5862821-5863320 Glycine max
Glyma.18G064200 1.0kb upstream 1.0kb upstream 2129 true Chr18: 5863321-5865449 Glycine max
Glyma.18G064200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 5864450-5865449 Glycine max
Glyma.18G064200 1.0kb downstream 1.0kb downstream 2129 true Chr18: 5862321-5864449 Glycine max
Glyma.18G064200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 5862321-5863320 Glycine max
Glyma.18G064200 2.0kb upstream 2.0kb upstream 3129 true Chr18: 5863321-5866449 Glycine max
Glyma.18G064200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 5864450-5866449 Glycine max
Glyma.18G064200 2.0kb downstream 2.0kb downstream 3129 true Chr18: 5861321-5864449 Glycine max
Glyma.18G064200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 5861321-5863320 Glycine max
Glyma.18G064200 5.0kb upstream 5.0kb upstream 6129 true Chr18: 5863321-5869449 Glycine max
Glyma.18G064200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 5864450-5869449 Glycine max
Glyma.18G064200 5.0kb downstream 5.0kb downstream 6129 true Chr18: 5858321-5864449 Glycine max
Glyma.18G064200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 5858321-5863320 Glycine max
Glyma.18G064200 10.0kb upstream 10.0kb upstream 11129 true Chr18: 5863321-5874449 Glycine max
Glyma.18G064200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 5864450-5874449 Glycine max
Glyma.18G064200 10.0kb downstream 10.0kb downstream 11129 true Chr18: 5853321-5864449 Glycine max
Glyma.18G064200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 5853321-5863320 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122242594 5265 Fabidae Singleton cluster - no MSA
124037324 5270 Rosid View MSA
123739032 5271 Pentapetalae View MSA
122769943 5272 Eudicot View MSA
122043766 5273 Angiosperm View MSA
121350885 5274 Embryophyte View MSA
123381922 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0736361 0.0 0.303675 Low  
cufflinks 0.0265882 0.0 0.119046 Low  
cufflinks 0.0632984 0.0 0.265577 Low  
cufflinks 0.0569288 0.0 0.239342 Low  
cufflinks 0.0726505 0.0 0.298794 Low  
cufflinks 0.0169968 0.0 0.0792002 Low Low
cufflinks 0.0748502 0.0 0.307986 Low  
cufflinks 0.076702 0.0 0.315506 Low  
cufflinks 0.0174506 0.0 0.0809941 Low Low
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain