Gene : Glyma.18G125700 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG3046 - Transcription factor, subunit of SRB subcomplex of RNA polymerase II Genomic Order:  1257
Name:  ? Glyma.18G125700 Secondary Identifier:  ? PAC:30554431
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G125700 0.5kb upstream 0.5kb upstream 5397 true Chr18: 16453703-16459099 Glycine max
Glyma.18G125700 0.5kb upstream 0.5kb upstream 500 false Chr18: 16453703-16454202 Glycine max
Glyma.18G125700 0.5kb downstream 0.5kb downstream 5397 true Chr18: 16454203-16459599 Glycine max
Glyma.18G125700 0.5kb downstream 0.5kb downstream 500 false Chr18: 16459100-16459599 Glycine max
Glyma.18G125700 1.0kb upstream 1.0kb upstream 5897 true Chr18: 16453203-16459099 Glycine max
Glyma.18G125700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 16453203-16454202 Glycine max
Glyma.18G125700 1.0kb downstream 1.0kb downstream 5897 true Chr18: 16454203-16460099 Glycine max
Glyma.18G125700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 16459100-16460099 Glycine max
Glyma.18G125700 2.0kb upstream 2.0kb upstream 6897 true Chr18: 16452203-16459099 Glycine max
Glyma.18G125700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 16452203-16454202 Glycine max
Glyma.18G125700 2.0kb downstream 2.0kb downstream 6897 true Chr18: 16454203-16461099 Glycine max
Glyma.18G125700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 16459100-16461099 Glycine max
Glyma.18G125700 5.0kb upstream 5.0kb upstream 9897 true Chr18: 16449203-16459099 Glycine max
Glyma.18G125700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 16449203-16454202 Glycine max
Glyma.18G125700 5.0kb downstream 5.0kb downstream 9897 true Chr18: 16454203-16464099 Glycine max
Glyma.18G125700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 16459100-16464099 Glycine max
Glyma.18G125700 10.0kb upstream 10.0kb upstream 14897 true Chr18: 16444203-16459099 Glycine max
Glyma.18G125700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 16444203-16454202 Glycine max
Glyma.18G125700 10.0kb downstream 10.0kb downstream 14897 true Chr18: 16454203-16469099 Glycine max
Glyma.18G125700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 16459100-16469099 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301301 5265 Fabidae View MSA
124062321 5270 Rosid View MSA
123743947 5271 Pentapetalae View MSA
122790703 5272 Eudicot View MSA
122043326 5273 Angiosperm View MSA
121345853 5274 Embryophyte View MSA
123425675 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.8213 0.0 78.0461   Low
cufflinks 23.7434 0.0 92.8307 High  
cufflinks 23.6671 0.0 92.0951 High  
cufflinks 21.4223 0.0 95.0855 High  
cufflinks 21.0355 0.0 94.6858 High  
cufflinks 19.6522 0.0 78.1598   Low
cufflinks 28.0949 0.0 124.297 High High
cufflinks 24.6049 0.0 108.246 High  
cufflinks 22.0809 0.0 86.8301 High  
cufflinks 0.873        
cufflinks 0.799        
cufflinks 0.888        
cufflinks 0.845        
cufflinks 0.779        
cufflinks 0.746       Low
cufflinks 1.055       High
cufflinks 0.77        
cufflinks 0.794        
cufflinks 0.956        
cufflinks 1.211       High
cufflinks 0.757       Low
cufflinks 1.088       High
cufflinks 0.83        
cufflinks 0.854        
cufflinks 1.154       High
cufflinks 0.847        

0 Strain