Gene : Glyma.18G130400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12346:SF8 - PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 1-RELATED Genomic Order:  1304
Name:  ? Glyma.18G130400 Secondary Identifier:  ? PAC:30555793
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G130400 0.5kb upstream 0.5kb upstream 13010 true Chr18: 18115103-18128112 Glycine max
Glyma.18G130400 0.5kb upstream 0.5kb upstream 500 false Chr18: 18115103-18115602 Glycine max
Glyma.18G130400 0.5kb downstream 0.5kb downstream 13010 true Chr18: 18115603-18128612 Glycine max
Glyma.18G130400 0.5kb downstream 0.5kb downstream 500 false Chr18: 18128113-18128612 Glycine max
Glyma.18G130400 1.0kb upstream 1.0kb upstream 13510 true Chr18: 18114603-18128112 Glycine max
Glyma.18G130400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 18114603-18115602 Glycine max
Glyma.18G130400 1.0kb downstream 1.0kb downstream 13510 true Chr18: 18115603-18129112 Glycine max
Glyma.18G130400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 18128113-18129112 Glycine max
Glyma.18G130400 2.0kb upstream 2.0kb upstream 14510 true Chr18: 18113603-18128112 Glycine max
Glyma.18G130400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 18113603-18115602 Glycine max
Glyma.18G130400 2.0kb downstream 2.0kb downstream 14510 true Chr18: 18115603-18130112 Glycine max
Glyma.18G130400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 18128113-18130112 Glycine max
Glyma.18G130400 5.0kb upstream 5.0kb upstream 17510 true Chr18: 18110603-18128112 Glycine max
Glyma.18G130400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 18110603-18115602 Glycine max
Glyma.18G130400 5.0kb downstream 5.0kb downstream 17510 true Chr18: 18115603-18133112 Glycine max
Glyma.18G130400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 18128113-18133112 Glycine max
Glyma.18G130400 10.0kb upstream 10.0kb upstream 22510 true Chr18: 18105603-18128112 Glycine max
Glyma.18G130400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 18105603-18115602 Glycine max
Glyma.18G130400 10.0kb downstream 10.0kb downstream 22510 true Chr18: 18115603-18138112 Glycine max
Glyma.18G130400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 18128113-18138112 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311868 5265 Fabidae View MSA
124067617 5270 Rosid View MSA
123752813 5271 Pentapetalae View MSA
122791038 5272 Eudicot View MSA
122047034 5273 Angiosperm View MSA
121346152 5274 Embryophyte View MSA
123428507 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.2833 0.0 41.9949   High
cufflinks 6.23636 0.0 22.3456    
cufflinks 12.0745 0.0 45.7128   High
cufflinks 5.2337 0.0 18.9853    
cufflinks 7.52693 0.0 26.7111    
cufflinks 5.53282 0.0 16.4419    
cufflinks 4.99455 0.0 17.9954   Low
cufflinks 7.07942 0.0 30.2675    
cufflinks 6.54456 0.0 23.2186    
cufflinks 1.308        
cufflinks 1.269        
cufflinks 1.738        
cufflinks 1.844       High
cufflinks 1.981       High
cufflinks 1.252        
cufflinks 1.464        
cufflinks 0.835       Low
cufflinks 1.408        
cufflinks 1.522        
cufflinks 1.607        
cufflinks 1.25        
cufflinks 1.695        
cufflinks 1.486        
cufflinks 1.541        
cufflinks 1.612        
cufflinks 1.401        

0 Strain