Gene : Glyma.18G153300 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG2102 - Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 Genomic Order:  1533
Name:  ? Glyma.18G153300 Secondary Identifier:  ? PAC:30556735
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G153300 0.5kb upstream 0.5kb upstream 18008 true Chr18: 29646866-29664873 Glycine max
Glyma.18G153300 0.5kb upstream 0.5kb upstream 500 false Chr18: 29646866-29647365 Glycine max
Glyma.18G153300 0.5kb downstream 0.5kb downstream 18008 true Chr18: 29647366-29665373 Glycine max
Glyma.18G153300 0.5kb downstream 0.5kb downstream 500 false Chr18: 29664874-29665373 Glycine max
Glyma.18G153300 1.0kb upstream 1.0kb upstream 18508 true Chr18: 29646366-29664873 Glycine max
Glyma.18G153300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 29646366-29647365 Glycine max
Glyma.18G153300 1.0kb downstream 1.0kb downstream 18508 true Chr18: 29647366-29665873 Glycine max
Glyma.18G153300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 29664874-29665873 Glycine max
Glyma.18G153300 2.0kb upstream 2.0kb upstream 19508 true Chr18: 29645366-29664873 Glycine max
Glyma.18G153300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 29645366-29647365 Glycine max
Glyma.18G153300 2.0kb downstream 2.0kb downstream 19508 true Chr18: 29647366-29666873 Glycine max
Glyma.18G153300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 29664874-29666873 Glycine max
Glyma.18G153300 5.0kb upstream 5.0kb upstream 22508 true Chr18: 29642366-29664873 Glycine max
Glyma.18G153300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 29642366-29647365 Glycine max
Glyma.18G153300 5.0kb downstream 5.0kb downstream 22508 true Chr18: 29647366-29669873 Glycine max
Glyma.18G153300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 29664874-29669873 Glycine max
Glyma.18G153300 10.0kb upstream 10.0kb upstream 27508 true Chr18: 29637366-29664873 Glycine max
Glyma.18G153300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 29637366-29647365 Glycine max
Glyma.18G153300 10.0kb downstream 10.0kb downstream 27508 true Chr18: 29647366-29674873 Glycine max
Glyma.18G153300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 29664874-29674873 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306534 5265 Fabidae View MSA
124066326 5270 Rosid View MSA
123739373 5271 Pentapetalae View MSA
122793499 5272 Eudicot View MSA
122042597 5273 Angiosperm View MSA
121346893 5274 Embryophyte View MSA
123424282 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.82983 0.0 34.6327   High
cufflinks 4.13416 0.0 18.5865    
cufflinks 4.08811 0.0 17.7797    
cufflinks 3.36883 0.0 17.6508    
cufflinks 2.54795 0.0 16.7855    
cufflinks 1.67406 0.0 10.0097   Low
cufflinks 3.03565 0.0 12.1804    
cufflinks 3.10432 0.0 14.4442    
cufflinks 2.38699 0.0 10.5167    
cufflinks 0.188        
cufflinks 0.113        
cufflinks 0.222        
cufflinks 0.097       Low
cufflinks 0.109        
cufflinks 0.187        
cufflinks 0.643       High
cufflinks 0.107        
cufflinks 0.189        
cufflinks 0.309        
cufflinks 0.694       High
cufflinks 0.102        
cufflinks 0.683       High
cufflinks 0.71       High
cufflinks 0.106        
cufflinks 0.684       High
cufflinks 0.091       Low

0 Strain