Gene : Glyma.18G153700 G. max Wm82.a2.v1
Defline:  (1 of 17) PF13359 - DDE superfamily endonuclease (DDE_Tnp_4) Genomic Order:  1537
Name:  ? Glyma.18G153700 Secondary Identifier:  ? PAC:30558660
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G153700 0.5kb upstream 0.5kb upstream 1161 true Chr18: 30238014-30239174 Glycine max
Glyma.18G153700 0.5kb upstream 0.5kb upstream 500 false Chr18: 30238675-30239174 Glycine max
Glyma.18G153700 0.5kb downstream 0.5kb downstream 1161 true Chr18: 30237514-30238674 Glycine max
Glyma.18G153700 0.5kb downstream 0.5kb downstream 500 false Chr18: 30237514-30238013 Glycine max
Glyma.18G153700 1.0kb upstream 1.0kb upstream 1661 true Chr18: 30238014-30239674 Glycine max
Glyma.18G153700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 30238675-30239674 Glycine max
Glyma.18G153700 1.0kb downstream 1.0kb downstream 1661 true Chr18: 30237014-30238674 Glycine max
Glyma.18G153700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 30237014-30238013 Glycine max
Glyma.18G153700 2.0kb upstream 2.0kb upstream 2661 true Chr18: 30238014-30240674 Glycine max
Glyma.18G153700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 30238675-30240674 Glycine max
Glyma.18G153700 2.0kb downstream 2.0kb downstream 2661 true Chr18: 30236014-30238674 Glycine max
Glyma.18G153700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 30236014-30238013 Glycine max
Glyma.18G153700 5.0kb upstream 5.0kb upstream 5661 true Chr18: 30238014-30243674 Glycine max
Glyma.18G153700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 30238675-30243674 Glycine max
Glyma.18G153700 5.0kb downstream 5.0kb downstream 5661 true Chr18: 30233014-30238674 Glycine max
Glyma.18G153700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 30233014-30238013 Glycine max
Glyma.18G153700 10.0kb upstream 10.0kb upstream 10661 true Chr18: 30238014-30248674 Glycine max
Glyma.18G153700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 30238675-30248674 Glycine max
Glyma.18G153700 10.0kb downstream 10.0kb downstream 10661 true Chr18: 30228014-30238674 Glycine max
Glyma.18G153700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 30228014-30238013 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779467 5273 Angiosperm View MSA
122247435 5265 Fabidae Singleton cluster - no MSA
123991202 5270 Rosid Singleton cluster - no MSA
123742965 5271 Pentapetalae View MSA
122770464 5272 Eudicot View MSA
121051126 5274 Embryophyte View MSA
123091231 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.103726 0.0 0.469461 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain