Gene : Glyma.18G140300 G. max Wm82.a2.v1
Defline:  (1 of 5) 3.4.19.3 - Pyroglutamyl-peptidase I / Pyrrolidone-carboxylate peptidase Genomic Order:  1403
Name:  ? Glyma.18G140300 Secondary Identifier:  ? PAC:30556714
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G140300 0.5kb upstream 0.5kb upstream 3504 true Chr18: 21204249-21207752 Glycine max
Glyma.18G140300 0.5kb upstream 0.5kb upstream 500 false Chr18: 21207253-21207752 Glycine max
Glyma.18G140300 0.5kb downstream 0.5kb downstream 3504 true Chr18: 21203749-21207252 Glycine max
Glyma.18G140300 0.5kb downstream 0.5kb downstream 500 false Chr18: 21203749-21204248 Glycine max
Glyma.18G140300 1.0kb upstream 1.0kb upstream 4004 true Chr18: 21204249-21208252 Glycine max
Glyma.18G140300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 21207253-21208252 Glycine max
Glyma.18G140300 1.0kb downstream 1.0kb downstream 4004 true Chr18: 21203249-21207252 Glycine max
Glyma.18G140300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 21203249-21204248 Glycine max
Glyma.18G140300 2.0kb upstream 2.0kb upstream 5004 true Chr18: 21204249-21209252 Glycine max
Glyma.18G140300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 21207253-21209252 Glycine max
Glyma.18G140300 2.0kb downstream 2.0kb downstream 5004 true Chr18: 21202249-21207252 Glycine max
Glyma.18G140300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 21202249-21204248 Glycine max
Glyma.18G140300 5.0kb upstream 5.0kb upstream 8004 true Chr18: 21204249-21212252 Glycine max
Glyma.18G140300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 21207253-21212252 Glycine max
Glyma.18G140300 5.0kb downstream 5.0kb downstream 8004 true Chr18: 21199249-21207252 Glycine max
Glyma.18G140300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 21199249-21204248 Glycine max
Glyma.18G140300 10.0kb upstream 10.0kb upstream 13004 true Chr18: 21204249-21217252 Glycine max
Glyma.18G140300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 21207253-21217252 Glycine max
Glyma.18G140300 10.0kb downstream 10.0kb downstream 13004 true Chr18: 21194249-21207252 Glycine max
Glyma.18G140300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 21194249-21204248 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026217 5273 Angiosperm View MSA
122309642 5265 Fabidae View MSA
124062104 5270 Rosid View MSA
123741081 5271 Pentapetalae View MSA
122790399 5272 Eudicot View MSA
121348835 5274 Embryophyte View MSA
123428644 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.47087 0.0 29.4478    
cufflinks 2.62631 0.0 18.2664    
cufflinks 3.4754 0.0 22.3755    
cufflinks 2.16056 0.0 18.7278    
cufflinks 3.10769 0.0 18.1221    
cufflinks 14.0781 0.0 64.3811   High
cufflinks 1.55266 0.0 10.8464   Low
cufflinks 16.4981 0.0 81.895   High
cufflinks 5.44541 0.0 34.9402    
cufflinks 0.252        
cufflinks 0.393        
cufflinks 0.187        
cufflinks 0.123        
cufflinks 0.025     Low Low
cufflinks 0.09        
cufflinks 0.138        
cufflinks 1.052       High
cufflinks 0.1     Low  
cufflinks 0.193        
cufflinks 0.108        
cufflinks 0.557       High
cufflinks 0.154        
cufflinks 0.245        
cufflinks 0.515        
cufflinks 0.114        
cufflinks 1.092       High

0 Strain