Gene : Glyma.18G130700 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR31358:SF6 - F3I6.9 PROTEIN Genomic Order:  1307
Name:  ? Glyma.18G130700 Secondary Identifier:  ? PAC:30557804
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G130700 0.5kb upstream 0.5kb upstream 6265 true Chr18: 18195670-18201934 Glycine max
Glyma.18G130700 0.5kb upstream 0.5kb upstream 500 false Chr18: 18195670-18196169 Glycine max
Glyma.18G130700 0.5kb downstream 0.5kb downstream 6265 true Chr18: 18196170-18202434 Glycine max
Glyma.18G130700 0.5kb downstream 0.5kb downstream 500 false Chr18: 18201935-18202434 Glycine max
Glyma.18G130700 1.0kb upstream 1.0kb upstream 6765 true Chr18: 18195170-18201934 Glycine max
Glyma.18G130700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 18195170-18196169 Glycine max
Glyma.18G130700 1.0kb downstream 1.0kb downstream 6765 true Chr18: 18196170-18202934 Glycine max
Glyma.18G130700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 18201935-18202934 Glycine max
Glyma.18G130700 2.0kb upstream 2.0kb upstream 7765 true Chr18: 18194170-18201934 Glycine max
Glyma.18G130700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 18194170-18196169 Glycine max
Glyma.18G130700 2.0kb downstream 2.0kb downstream 7765 true Chr18: 18196170-18203934 Glycine max
Glyma.18G130700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 18201935-18203934 Glycine max
Glyma.18G130700 5.0kb upstream 5.0kb upstream 10765 true Chr18: 18191170-18201934 Glycine max
Glyma.18G130700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 18191170-18196169 Glycine max
Glyma.18G130700 5.0kb downstream 5.0kb downstream 10765 true Chr18: 18196170-18206934 Glycine max
Glyma.18G130700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 18201935-18206934 Glycine max
Glyma.18G130700 10.0kb upstream 10.0kb upstream 15765 true Chr18: 18186170-18201934 Glycine max
Glyma.18G130700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 18186170-18196169 Glycine max
Glyma.18G130700 10.0kb downstream 10.0kb downstream 15765 true Chr18: 18196170-18211934 Glycine max
Glyma.18G130700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 18201935-18211934 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309627 5265 Fabidae View MSA
124060962 5270 Rosid View MSA
123746894 5271 Pentapetalae View MSA
122791209 5272 Eudicot View MSA
122048552 5273 Angiosperm View MSA
121351484 5274 Embryophyte View MSA
123382183 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.59153 0.0 22.8704    
cufflinks 10.0259 0.0 34.2612    
cufflinks 7.40992 0.0 25.5654    
cufflinks 12.3991 0.0 38.2775   High
cufflinks 3.83825 0.0 12.8204   Low
cufflinks 4.10591 0.0 13.9991   Low
cufflinks 9.32744 0.0 28.7096    
cufflinks 7.88257 0.0 27.1437    
cufflinks 4.70928 0.0 15.5232    
cufflinks 3.079        
cufflinks 0.169       Low
cufflinks 4.283        
cufflinks 1.123        
cufflinks 0.906        
cufflinks 0.719        
cufflinks 2.448        
cufflinks 0.526        
cufflinks 7.066       High
cufflinks 3.819        
cufflinks 3.92        
cufflinks 0.238       Low
cufflinks 3.91        
cufflinks 2.508        
cufflinks 0.182       Low
cufflinks 2.896        
cufflinks 0.677        

0 Strain