Gene : Glyma.18G137500 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR31062:SF25 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 33-RELATED Genomic Order:  1375
Name:  ? Glyma.18G137500 Secondary Identifier:  ? PAC:30554371
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G137500 0.5kb upstream 0.5kb upstream 2778 true Chr18: 20199831-20202608 Glycine max
Glyma.18G137500 0.5kb upstream 0.5kb upstream 500 false Chr18: 20202109-20202608 Glycine max
Glyma.18G137500 0.5kb downstream 0.5kb downstream 2778 true Chr18: 20199331-20202108 Glycine max
Glyma.18G137500 0.5kb downstream 0.5kb downstream 500 false Chr18: 20199331-20199830 Glycine max
Glyma.18G137500 1.0kb upstream 1.0kb upstream 3278 true Chr18: 20199831-20203108 Glycine max
Glyma.18G137500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 20202109-20203108 Glycine max
Glyma.18G137500 1.0kb downstream 1.0kb downstream 3278 true Chr18: 20198831-20202108 Glycine max
Glyma.18G137500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 20198831-20199830 Glycine max
Glyma.18G137500 2.0kb upstream 2.0kb upstream 4278 true Chr18: 20199831-20204108 Glycine max
Glyma.18G137500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 20202109-20204108 Glycine max
Glyma.18G137500 2.0kb downstream 2.0kb downstream 4278 true Chr18: 20197831-20202108 Glycine max
Glyma.18G137500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 20197831-20199830 Glycine max
Glyma.18G137500 5.0kb upstream 5.0kb upstream 7278 true Chr18: 20199831-20207108 Glycine max
Glyma.18G137500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 20202109-20207108 Glycine max
Glyma.18G137500 5.0kb downstream 5.0kb downstream 7278 true Chr18: 20194831-20202108 Glycine max
Glyma.18G137500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 20194831-20199830 Glycine max
Glyma.18G137500 10.0kb upstream 10.0kb upstream 12278 true Chr18: 20199831-20212108 Glycine max
Glyma.18G137500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 20202109-20212108 Glycine max
Glyma.18G137500 10.0kb downstream 10.0kb downstream 12278 true Chr18: 20189831-20202108 Glycine max
Glyma.18G137500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 20189831-20199830 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301068 5265 Fabidae View MSA
124065411 5270 Rosid View MSA
123745247 5271 Pentapetalae View MSA
122794660 5272 Eudicot View MSA
122049542 5273 Angiosperm View MSA
121347970 5274 Embryophyte View MSA
123380694 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.39622 0.0 7.97763    
cufflinks 2.34008 0.0 7.78694    
cufflinks 26.7924 0.0 71.6079 High  
cufflinks 1.61001 0.0 5.58509   Low
cufflinks 31.3144 0.0 83.851 High High
cufflinks 50.0447 0.0 137.829 High High
cufflinks 3.21751 0.0 10.3125    
cufflinks 10.3316 0.0 28.4898    
cufflinks 8.91157 0.0 24.8987    
cufflinks 15.376     High High
cufflinks 0.422        
cufflinks 16.561     High High
cufflinks 22.116     High High
cufflinks 41.972     High High
cufflinks 0.085       Low
cufflinks 0.435        
cufflinks 5.399        
cufflinks 6.281        
cufflinks 0.763        
cufflinks 0.063     Low Low
cufflinks 0.3        
cufflinks 0.171        
cufflinks 0.157        
cufflinks 0.235        
cufflinks 0.321        
cufflinks 2.673        

0 Strain