Gene : Glyma.18G197500 G. max Wm82.a2.v1
Defline:  (1 of 14) PTHR24078:SF261 - DNAJ (HSP40) HOMOLOG, SUBFAMILY A, MEMBER 3A Genomic Order:  1975
Name:  ? Glyma.18G197500 Secondary Identifier:  ? PAC:30558572
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G197500 0.5kb upstream 0.5kb upstream 3525 true Chr18: 47377326-47380850 Glycine max
Glyma.18G197500 0.5kb upstream 0.5kb upstream 500 false Chr18: 47377326-47377825 Glycine max
Glyma.18G197500 0.5kb downstream 0.5kb downstream 3525 true Chr18: 47377826-47381350 Glycine max
Glyma.18G197500 0.5kb downstream 0.5kb downstream 500 false Chr18: 47380851-47381350 Glycine max
Glyma.18G197500 1.0kb upstream 1.0kb upstream 4025 true Chr18: 47376826-47380850 Glycine max
Glyma.18G197500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 47376826-47377825 Glycine max
Glyma.18G197500 1.0kb downstream 1.0kb downstream 4025 true Chr18: 47377826-47381850 Glycine max
Glyma.18G197500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 47380851-47381850 Glycine max
Glyma.18G197500 2.0kb upstream 2.0kb upstream 5025 true Chr18: 47375826-47380850 Glycine max
Glyma.18G197500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 47375826-47377825 Glycine max
Glyma.18G197500 2.0kb downstream 2.0kb downstream 5025 true Chr18: 47377826-47382850 Glycine max
Glyma.18G197500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 47380851-47382850 Glycine max
Glyma.18G197500 5.0kb upstream 5.0kb upstream 8025 true Chr18: 47372826-47380850 Glycine max
Glyma.18G197500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 47372826-47377825 Glycine max
Glyma.18G197500 5.0kb downstream 5.0kb downstream 8025 true Chr18: 47377826-47385850 Glycine max
Glyma.18G197500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 47380851-47385850 Glycine max
Glyma.18G197500 10.0kb upstream 10.0kb upstream 13025 true Chr18: 47367826-47380850 Glycine max
Glyma.18G197500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 47367826-47377825 Glycine max
Glyma.18G197500 10.0kb downstream 10.0kb downstream 13025 true Chr18: 47377826-47390850 Glycine max
Glyma.18G197500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 47380851-47390850 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309492 5265 Fabidae View MSA
124062847 5270 Rosid View MSA
123748936 5271 Pentapetalae View MSA
122794649 5272 Eudicot View MSA
122047094 5273 Angiosperm View MSA
121310689 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.01487 0.0 3.512   Low
cufflinks 3.20556 0.0 9.51991    
cufflinks 2.61607 0.0 7.93613    
cufflinks 7.65977 0.0 20.793   High
cufflinks 3.7519 0.0 10.9464    
cufflinks 3.32308 0.0 9.83544    
cufflinks 0.844273 0.0 2.97071   Low
cufflinks 13.2754 0.0 35.4191   High
cufflinks 2.98392 0.0 8.94564    
cufflinks 7.149       High
cufflinks 0.227       Low
cufflinks 3.17        
cufflinks 4.618       High
cufflinks 3.515        
cufflinks 0.031     Low Low
cufflinks 0.961        
cufflinks 0.928        
cufflinks 5.281       High
cufflinks 2.926        
cufflinks 0.842        
cufflinks 0.338        
cufflinks 1.076        
cufflinks 0.885        
cufflinks 0.433        
cufflinks 1.092        
cufflinks 0.577        

0 Strain