Gene : Glyma.18G200300 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR11695:SF395 - ALCOHOL DEHYDROGENASE-LIKE 3-RELATED Genomic Order:  2003
Name:  ? Glyma.18G200300 Secondary Identifier:  ? PAC:30557586
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5486 Glycine max pathologic  
Gmax PWY-6333 Glycine max pathologic  
Gmax PWY66-21 Glycine max pathologic  
Gmax PWY66-389 Glycine max pathologic  
Gmax PWY-6802 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G200300 0.5kb upstream 0.5kb upstream 6637 true Chr18: 47968551-47975187 Glycine max
Glyma.18G200300 0.5kb upstream 0.5kb upstream 500 false Chr18: 47968551-47969050 Glycine max
Glyma.18G200300 0.5kb downstream 0.5kb downstream 6637 true Chr18: 47969051-47975687 Glycine max
Glyma.18G200300 0.5kb downstream 0.5kb downstream 500 false Chr18: 47975188-47975687 Glycine max
Glyma.18G200300 1.0kb upstream 1.0kb upstream 7137 true Chr18: 47968051-47975187 Glycine max
Glyma.18G200300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 47968051-47969050 Glycine max
Glyma.18G200300 1.0kb downstream 1.0kb downstream 7137 true Chr18: 47969051-47976187 Glycine max
Glyma.18G200300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 47975188-47976187 Glycine max
Glyma.18G200300 2.0kb upstream 2.0kb upstream 8137 true Chr18: 47967051-47975187 Glycine max
Glyma.18G200300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 47967051-47969050 Glycine max
Glyma.18G200300 2.0kb downstream 2.0kb downstream 8137 true Chr18: 47969051-47977187 Glycine max
Glyma.18G200300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 47975188-47977187 Glycine max
Glyma.18G200300 5.0kb upstream 5.0kb upstream 11137 true Chr18: 47964051-47975187 Glycine max
Glyma.18G200300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 47964051-47969050 Glycine max
Glyma.18G200300 5.0kb downstream 5.0kb downstream 11137 true Chr18: 47969051-47980187 Glycine max
Glyma.18G200300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 47975188-47980187 Glycine max
Glyma.18G200300 10.0kb upstream 10.0kb upstream 16137 true Chr18: 47959051-47975187 Glycine max
Glyma.18G200300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 47959051-47969050 Glycine max
Glyma.18G200300 10.0kb downstream 10.0kb downstream 16137 true Chr18: 47969051-47985187 Glycine max
Glyma.18G200300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 47975188-47985187 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300570 5265 Fabidae View MSA
124061215 5270 Rosid View MSA
123741103 5271 Pentapetalae View MSA
122790051 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.34789 0.0 31.7497    
cufflinks 20.3919 0.0 76.6308 High  
cufflinks 6.90025 0.0 28.1441    
cufflinks 4.60955 0.0 21.994   Low
cufflinks 16.1285 0.0 60.418    
cufflinks 37.1492 0.0 148.426 High High
cufflinks 35.6015 0.0 140.402 High High
cufflinks 10.1052 0.0 30.7434    
cufflinks 7.93404 0.0 31.0846    
cufflinks 1.125        
cufflinks 1.514        
cufflinks 1.209        
cufflinks 1.483        
cufflinks 1.41        
cufflinks 0.354       Low
cufflinks 1.721        
cufflinks 4.016       High
cufflinks 1.173        
cufflinks 4.3       High
cufflinks 1.534        
cufflinks 0.97        
cufflinks 2.171        
cufflinks 1.987        
cufflinks 2.887        
cufflinks 1.609        
cufflinks 5.015       High

0 Strain