Gene : Glyma.18G200800 G. max Wm82.a2.v1
Defline:  (1 of 11) PF04791 - LMBR1-like membrane protein (LMBR1) Genomic Order:  2008
Name:  ? Glyma.18G200800 Secondary Identifier:  ? PAC:30558066
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G200800 0.5kb upstream 0.5kb upstream 6517 true Chr18: 48051750-48058266 Glycine max
Glyma.18G200800 0.5kb upstream 0.5kb upstream 500 false Chr18: 48051750-48052249 Glycine max
Glyma.18G200800 0.5kb downstream 0.5kb downstream 6517 true Chr18: 48052250-48058766 Glycine max
Glyma.18G200800 0.5kb downstream 0.5kb downstream 500 false Chr18: 48058267-48058766 Glycine max
Glyma.18G200800 1.0kb upstream 1.0kb upstream 7017 true Chr18: 48051250-48058266 Glycine max
Glyma.18G200800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 48051250-48052249 Glycine max
Glyma.18G200800 1.0kb downstream 1.0kb downstream 7017 true Chr18: 48052250-48059266 Glycine max
Glyma.18G200800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 48058267-48059266 Glycine max
Glyma.18G200800 2.0kb upstream 2.0kb upstream 8017 true Chr18: 48050250-48058266 Glycine max
Glyma.18G200800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 48050250-48052249 Glycine max
Glyma.18G200800 2.0kb downstream 2.0kb downstream 8017 true Chr18: 48052250-48060266 Glycine max
Glyma.18G200800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 48058267-48060266 Glycine max
Glyma.18G200800 5.0kb upstream 5.0kb upstream 11017 true Chr18: 48047250-48058266 Glycine max
Glyma.18G200800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 48047250-48052249 Glycine max
Glyma.18G200800 5.0kb downstream 5.0kb downstream 11017 true Chr18: 48052250-48063266 Glycine max
Glyma.18G200800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 48058267-48063266 Glycine max
Glyma.18G200800 10.0kb upstream 10.0kb upstream 16017 true Chr18: 48042250-48058266 Glycine max
Glyma.18G200800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 48042250-48052249 Glycine max
Glyma.18G200800 10.0kb downstream 10.0kb downstream 16017 true Chr18: 48052250-48068266 Glycine max
Glyma.18G200800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 48058267-48068266 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305442 5265 Fabidae View MSA
124062983 5270 Rosid View MSA
123738409 5271 Pentapetalae View MSA
122789595 5272 Eudicot View MSA
122044357 5273 Angiosperm View MSA
121350355 5274 Embryophyte View MSA
123427151 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5002 0.0 28.2257   Low
cufflinks 13.157 0.0 35.1494    
cufflinks 13.7309 0.0 36.6602    
cufflinks 19.4107 0.0 51.9301   High
cufflinks 19.6026 0.0 52.4789   High
cufflinks 17.9756 0.0 48.0273    
cufflinks 14.889 0.0 39.7231    
cufflinks 17.6126 0.0 47.0374    
cufflinks 15.9939 0.0 42.6747    
cufflinks 6.313        
cufflinks 7.163     High High
cufflinks 3.846       Low
cufflinks 6.633        
cufflinks 6.179        
cufflinks 5.648     High  
cufflinks 5.827        
cufflinks 5.937        
cufflinks 4.37       Low
cufflinks 5.326        
cufflinks 4.784        
cufflinks 7.45     High High
cufflinks 4.916        
cufflinks 4.432       Low
cufflinks 7.058     High High
cufflinks 4.563       Low
cufflinks 7.104     High High

0 Strain