Gene : Glyma.18G177300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11709//PTHR11709:SF70 - MULTI-COPPER OXIDASE Genomic Order:  1773
Name:  ? Glyma.18G177300 Secondary Identifier:  ? PAC:30555777
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5466 Glycine max pathologic  
Gmax PWY-6824 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G177300 0.5kb upstream 0.5kb upstream 3329 true Chr18: 42252244-42255572 Glycine max
Glyma.18G177300 0.5kb upstream 0.5kb upstream 500 false Chr18: 42255073-42255572 Glycine max
Glyma.18G177300 0.5kb downstream 0.5kb downstream 3329 true Chr18: 42251744-42255072 Glycine max
Glyma.18G177300 0.5kb downstream 0.5kb downstream 500 false Chr18: 42251744-42252243 Glycine max
Glyma.18G177300 1.0kb upstream 1.0kb upstream 3829 true Chr18: 42252244-42256072 Glycine max
Glyma.18G177300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 42255073-42256072 Glycine max
Glyma.18G177300 1.0kb downstream 1.0kb downstream 3829 true Chr18: 42251244-42255072 Glycine max
Glyma.18G177300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 42251244-42252243 Glycine max
Glyma.18G177300 2.0kb upstream 2.0kb upstream 4829 true Chr18: 42252244-42257072 Glycine max
Glyma.18G177300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 42255073-42257072 Glycine max
Glyma.18G177300 2.0kb downstream 2.0kb downstream 4829 true Chr18: 42250244-42255072 Glycine max
Glyma.18G177300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 42250244-42252243 Glycine max
Glyma.18G177300 5.0kb upstream 5.0kb upstream 7829 true Chr18: 42252244-42260072 Glycine max
Glyma.18G177300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 42255073-42260072 Glycine max
Glyma.18G177300 5.0kb downstream 5.0kb downstream 7829 true Chr18: 42247244-42255072 Glycine max
Glyma.18G177300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 42247244-42252243 Glycine max
Glyma.18G177300 10.0kb upstream 10.0kb upstream 12829 true Chr18: 42252244-42265072 Glycine max
Glyma.18G177300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 42255073-42265072 Glycine max
Glyma.18G177300 10.0kb downstream 10.0kb downstream 12829 true Chr18: 42242244-42255072 Glycine max
Glyma.18G177300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 42242244-42252243 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313591 5265 Fabidae View MSA
124062715 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.208311 0.0 0.798525 Low  
cufflinks 0.805466 0.0 2.87931    
cufflinks 0.180069 0.0 0.694394 Low  
cufflinks 2.78403 0.0 8.6237   High
cufflinks 0.684096 0.0 2.4705    
cufflinks 0.170336 0.0 0.658607 Low  
cufflinks 0.142218 0.0 0.553792 Low Low
cufflinks 4.58185 0.0 13.2373   High
cufflinks 1.17581 0.0 4.07049    
cufflinks 3.672       High
cufflinks 0.034     Low Low
cufflinks 0.022     Low Low
cufflinks 0.439        
cufflinks 0.045     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.657        
cufflinks 0.198        
cufflinks 0.146        
cufflinks 0.142        
cufflinks 0.649        
cufflinks 0.083        
cufflinks 0.71        
cufflinks 0.271        
cufflinks 0.035     Low Low
cufflinks 0.546        
cufflinks 0.229        

0 Strain