Gene : Glyma.18G179800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR21562:SF6 - PECTINACETYLESTERASE FAMILY PROTEIN Genomic Order:  1798
Name:  ? Glyma.18G179800 Secondary Identifier:  ? PAC:30554862
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G179800 0.5kb upstream 0.5kb upstream 10804 true Chr18: 43339786-43350589 Glycine max
Glyma.18G179800 0.5kb upstream 0.5kb upstream 500 false Chr18: 43339786-43340285 Glycine max
Glyma.18G179800 0.5kb downstream 0.5kb downstream 10804 true Chr18: 43340286-43351089 Glycine max
Glyma.18G179800 0.5kb downstream 0.5kb downstream 500 false Chr18: 43350590-43351089 Glycine max
Glyma.18G179800 1.0kb upstream 1.0kb upstream 11304 true Chr18: 43339286-43350589 Glycine max
Glyma.18G179800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 43339286-43340285 Glycine max
Glyma.18G179800 1.0kb downstream 1.0kb downstream 11304 true Chr18: 43340286-43351589 Glycine max
Glyma.18G179800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 43350590-43351589 Glycine max
Glyma.18G179800 2.0kb upstream 2.0kb upstream 12304 true Chr18: 43338286-43350589 Glycine max
Glyma.18G179800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 43338286-43340285 Glycine max
Glyma.18G179800 2.0kb downstream 2.0kb downstream 12304 true Chr18: 43340286-43352589 Glycine max
Glyma.18G179800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 43350590-43352589 Glycine max
Glyma.18G179800 5.0kb upstream 5.0kb upstream 15304 true Chr18: 43335286-43350589 Glycine max
Glyma.18G179800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 43335286-43340285 Glycine max
Glyma.18G179800 5.0kb downstream 5.0kb downstream 15304 true Chr18: 43340286-43355589 Glycine max
Glyma.18G179800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 43350590-43355589 Glycine max
Glyma.18G179800 10.0kb upstream 10.0kb upstream 20304 true Chr18: 43330286-43350589 Glycine max
Glyma.18G179800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 43330286-43340285 Glycine max
Glyma.18G179800 10.0kb downstream 10.0kb downstream 20304 true Chr18: 43340286-43360589 Glycine max
Glyma.18G179800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 43350590-43360589 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305642 5265 Fabidae View MSA
124061185 5270 Rosid View MSA
123736666 5271 Pentapetalae View MSA
122769871 5272 Eudicot View MSA
122042324 5273 Angiosperm View MSA
121351620 5274 Embryophyte View MSA
123428380 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.08478 0.0 18.213    
cufflinks 5.6511 0.0 19.6454    
cufflinks 3.27517 0.0 18.1221   Low
cufflinks 5.94776 0.0 20.4188    
cufflinks 8.51214 0.0 27.255   High
cufflinks 8.39797 0.0 26.8221   High
cufflinks 3.69368 0.0 17.8975   Low
cufflinks 5.04236 0.0 18.1451    
cufflinks 5.7641 0.0 27.2802    
cufflinks 1.256       High
cufflinks 0.077       Low
cufflinks 0.555        
cufflinks 1.109        
cufflinks 1.051        
cufflinks 0.088       Low
cufflinks 0.576        
cufflinks 0.641        
cufflinks 1.103        
cufflinks 1.007        
cufflinks 0.399        
cufflinks 0.178       Low
cufflinks 0.576        
cufflinks 1.402       High
cufflinks 0.14       Low
cufflinks 0.37        
cufflinks 0.473        

0 Strain