Gene : Glyma.18G174500 G. max Wm82.a2.v1
Defline:  (1 of 26) PTHR10042 - EARLY GROWTH RESPONSE PROTEIN-RELATED Genomic Order:  1745
Name:  ? Glyma.18G174500 Secondary Identifier:  ? PAC:30558070
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G174500 0.5kb upstream 0.5kb upstream 1654 true Chr18: 41360511-41362164 Glycine max
Glyma.18G174500 0.5kb upstream 0.5kb upstream 500 false Chr18: 41360511-41361010 Glycine max
Glyma.18G174500 0.5kb downstream 0.5kb downstream 1654 true Chr18: 41361011-41362664 Glycine max
Glyma.18G174500 0.5kb downstream 0.5kb downstream 500 false Chr18: 41362165-41362664 Glycine max
Glyma.18G174500 1.0kb upstream 1.0kb upstream 2154 true Chr18: 41360011-41362164 Glycine max
Glyma.18G174500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 41360011-41361010 Glycine max
Glyma.18G174500 1.0kb downstream 1.0kb downstream 2154 true Chr18: 41361011-41363164 Glycine max
Glyma.18G174500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 41362165-41363164 Glycine max
Glyma.18G174500 2.0kb upstream 2.0kb upstream 3154 true Chr18: 41359011-41362164 Glycine max
Glyma.18G174500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 41359011-41361010 Glycine max
Glyma.18G174500 2.0kb downstream 2.0kb downstream 3154 true Chr18: 41361011-41364164 Glycine max
Glyma.18G174500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 41362165-41364164 Glycine max
Glyma.18G174500 5.0kb upstream 5.0kb upstream 6154 true Chr18: 41356011-41362164 Glycine max
Glyma.18G174500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 41356011-41361010 Glycine max
Glyma.18G174500 5.0kb downstream 5.0kb downstream 6154 true Chr18: 41361011-41367164 Glycine max
Glyma.18G174500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 41362165-41367164 Glycine max
Glyma.18G174500 10.0kb upstream 10.0kb upstream 11154 true Chr18: 41351011-41362164 Glycine max
Glyma.18G174500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 41351011-41361010 Glycine max
Glyma.18G174500 10.0kb downstream 10.0kb downstream 11154 true Chr18: 41361011-41372164 Glycine max
Glyma.18G174500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 41362165-41372164 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313719 5265 Fabidae View MSA
124063867 5270 Rosid View MSA
123749739 5271 Pentapetalae View MSA
122794818 5272 Eudicot View MSA
122051006 5273 Angiosperm View MSA
121350581 5274 Embryophyte View MSA
123381808 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.03438 0.0 10.2734   High
cufflinks 0.270215 0.0 1.05593    
cufflinks 0.387393 0.0 1.48959    
cufflinks 0.210034 0.0 0.827751    
cufflinks 1.85789 0.0 6.58581   High
cufflinks 0.174764 0.0 0.694076 Low  
cufflinks 0.758443 0.0 2.83472    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.092228 0.0 0.37574 Low Low
cufflinks 0.073     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.415        
cufflinks 0.206       Low
cufflinks 0.637        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.446        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.565        
cufflinks 0.748        
cufflinks 5.393       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.403       High
cufflinks 1.985        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.282        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain