Gene : Glyma.18G220800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12290:SF18 - PROTEIN CORNICHON HOMOLOG 3-RELATED Genomic Order:  2208
Name:  ? Glyma.18G220800 Secondary Identifier:  ? PAC:30557759
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G220800 0.5kb upstream 0.5kb upstream 3480 true Chr18: 50781988-50785467 Glycine max
Glyma.18G220800 0.5kb upstream 0.5kb upstream 500 false Chr18: 50781988-50782487 Glycine max
Glyma.18G220800 0.5kb downstream 0.5kb downstream 3480 true Chr18: 50782488-50785967 Glycine max
Glyma.18G220800 0.5kb downstream 0.5kb downstream 500 false Chr18: 50785468-50785967 Glycine max
Glyma.18G220800 1.0kb upstream 1.0kb upstream 3980 true Chr18: 50781488-50785467 Glycine max
Glyma.18G220800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 50781488-50782487 Glycine max
Glyma.18G220800 1.0kb downstream 1.0kb downstream 3980 true Chr18: 50782488-50786467 Glycine max
Glyma.18G220800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 50785468-50786467 Glycine max
Glyma.18G220800 2.0kb upstream 2.0kb upstream 4980 true Chr18: 50780488-50785467 Glycine max
Glyma.18G220800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 50780488-50782487 Glycine max
Glyma.18G220800 2.0kb downstream 2.0kb downstream 4980 true Chr18: 50782488-50787467 Glycine max
Glyma.18G220800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 50785468-50787467 Glycine max
Glyma.18G220800 5.0kb upstream 5.0kb upstream 7980 true Chr18: 50777488-50785467 Glycine max
Glyma.18G220800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 50777488-50782487 Glycine max
Glyma.18G220800 5.0kb downstream 5.0kb downstream 7980 true Chr18: 50782488-50790467 Glycine max
Glyma.18G220800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 50785468-50790467 Glycine max
Glyma.18G220800 10.0kb upstream 10.0kb upstream 12980 true Chr18: 50772488-50785467 Glycine max
Glyma.18G220800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 50772488-50782487 Glycine max
Glyma.18G220800 10.0kb downstream 10.0kb downstream 12980 true Chr18: 50782488-50795467 Glycine max
Glyma.18G220800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 50785468-50795467 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307657 5265 Fabidae View MSA
124061423 5270 Rosid View MSA
123752732 5271 Pentapetalae View MSA
122796851 5272 Eudicot View MSA
122045878 5273 Angiosperm View MSA
121348735 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.56841 0.0 8.86392    
cufflinks 2.04659 0.0 7.19624    
cufflinks 6.35259 0.0 19.3442   High
cufflinks 2.60066 0.0 8.93738    
cufflinks 1.90632 0.0 6.74643    
cufflinks 2.94071 0.0 9.97756    
cufflinks 4.14089 0.0 13.5107   High
cufflinks 1.89371 0.0 6.70332    
cufflinks 1.30274 0.0 4.72844   Low
cufflinks 0.21        
cufflinks 0.125       Low
cufflinks 0.684        
cufflinks 1.048       High
cufflinks 1.123       High
cufflinks 0.096       Low
cufflinks 0.565        
cufflinks 0.523        
cufflinks 0.995       High
cufflinks 0.763        
cufflinks 0.385        
cufflinks 0.099       Low
cufflinks 0.48        
cufflinks 0.784        
cufflinks 0.188        
cufflinks 0.373        
cufflinks 0.32        

0 Strain