Gene : Glyma.18G221000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31529:SF3 - LOB DOMAIN-CONTAINING PROTEIN 18-RELATED Genomic Order:  2210
Name:  ? Glyma.18G221000 Secondary Identifier:  ? PAC:30558055
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G221000 0.5kb upstream 0.5kb upstream 5128 true Chr18: 50818373-50823500 Glycine max
Glyma.18G221000 0.5kb upstream 0.5kb upstream 500 false Chr18: 50818373-50818872 Glycine max
Glyma.18G221000 0.5kb downstream 0.5kb downstream 5128 true Chr18: 50818873-50824000 Glycine max
Glyma.18G221000 0.5kb downstream 0.5kb downstream 500 false Chr18: 50823501-50824000 Glycine max
Glyma.18G221000 1.0kb upstream 1.0kb upstream 5628 true Chr18: 50817873-50823500 Glycine max
Glyma.18G221000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 50817873-50818872 Glycine max
Glyma.18G221000 1.0kb downstream 1.0kb downstream 5628 true Chr18: 50818873-50824500 Glycine max
Glyma.18G221000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 50823501-50824500 Glycine max
Glyma.18G221000 2.0kb upstream 2.0kb upstream 6628 true Chr18: 50816873-50823500 Glycine max
Glyma.18G221000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 50816873-50818872 Glycine max
Glyma.18G221000 2.0kb downstream 2.0kb downstream 6628 true Chr18: 50818873-50825500 Glycine max
Glyma.18G221000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 50823501-50825500 Glycine max
Glyma.18G221000 5.0kb upstream 5.0kb upstream 9628 true Chr18: 50813873-50823500 Glycine max
Glyma.18G221000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 50813873-50818872 Glycine max
Glyma.18G221000 5.0kb downstream 5.0kb downstream 9628 true Chr18: 50818873-50828500 Glycine max
Glyma.18G221000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 50823501-50828500 Glycine max
Glyma.18G221000 10.0kb upstream 10.0kb upstream 14628 true Chr18: 50808873-50823500 Glycine max
Glyma.18G221000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 50808873-50818872 Glycine max
Glyma.18G221000 10.0kb downstream 10.0kb downstream 14628 true Chr18: 50818873-50833500 Glycine max
Glyma.18G221000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 50823501-50833500 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305251 5265 Fabidae View MSA
124061672 5270 Rosid View MSA
123743730 5271 Pentapetalae View MSA
122791907 5272 Eudicot View MSA
122045879 5273 Angiosperm View MSA
121351593 5274 Embryophyte View MSA
123382239 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0446935 0.0 0.1909 Low  
cufflinks 0.087952 0.0 0.359219 Low  
cufflinks 1.20637 0.0 4.39145   High
cufflinks 0.018742 0.0 0.0861038 Low Low
cufflinks 0.250983 0.0 0.982335 Low  
cufflinks 3.7518 0.0 12.284   High
cufflinks 0.0666737 0.0 0.276112 Low  
cufflinks 0.376909 0.0 1.44974    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.024     Low High
cufflinks 0.004     Low Low
cufflinks 0.017     Low  
cufflinks 0.008     Low  
cufflinks 0.024     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.006     Low  
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.008     Low  
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain