Gene : Glyma.18G221600 G. max Wm82.a2.v1

Defline:  (1 of 4) PTHR24115:SF533 - ARMADILLO REPEAT-CONTAINING KINESIN-LIKE PROTEIN 2 Genomic Order:  2216
Name:  ? Glyma.18G221600 Secondary Identifier:  ? PAC:30554442

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Genomics

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Expression

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G221600 0.5kb upstream 0.5kb upstream 11640 true Chr18: 50864003-50875642 Glycine max
Glyma.18G221600 0.5kb upstream 0.5kb upstream 500 false Chr18: 50875143-50875642 Glycine max
Glyma.18G221600 0.5kb downstream 0.5kb downstream 11640 true Chr18: 50863503-50875142 Glycine max
Glyma.18G221600 0.5kb downstream 0.5kb downstream 500 false Chr18: 50863503-50864002 Glycine max
Glyma.18G221600 1.0kb upstream 1.0kb upstream 12140 true Chr18: 50864003-50876142 Glycine max
Glyma.18G221600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 50875143-50876142 Glycine max
Glyma.18G221600 1.0kb downstream 1.0kb downstream 12140 true Chr18: 50863003-50875142 Glycine max
Glyma.18G221600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 50863003-50864002 Glycine max
Glyma.18G221600 2.0kb upstream 2.0kb upstream 13140 true Chr18: 50864003-50877142 Glycine max
Glyma.18G221600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 50875143-50877142 Glycine max
Glyma.18G221600 2.0kb downstream 2.0kb downstream 13140 true Chr18: 50862003-50875142 Glycine max
Glyma.18G221600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 50862003-50864002 Glycine max
Glyma.18G221600 5.0kb upstream 5.0kb upstream 16140 true Chr18: 50864003-50880142 Glycine max
Glyma.18G221600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 50875143-50880142 Glycine max
Glyma.18G221600 5.0kb downstream 5.0kb downstream 16140 true Chr18: 50859003-50875142 Glycine max
Glyma.18G221600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 50859003-50864002 Glycine max
Glyma.18G221600 10.0kb upstream 10.0kb upstream 21140 true Chr18: 50864003-50885142 Glycine max
Glyma.18G221600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 50875143-50885142 Glycine max
Glyma.18G221600 10.0kb downstream 10.0kb downstream 21140 true Chr18: 50854003-50875142 Glycine max
Glyma.18G221600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 50854003-50864002 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307519 5265 Fabidae View MSA
124063655 5270 Rosid View MSA
123750821 5271 Pentapetalae View MSA
122788276 5272 Eudicot View MSA
122045625 5273 Angiosperm View MSA
123429039 5275 Viridiplantae View MSA
121350533 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.02901 0.0 8.58504   Low
cufflinks 4.82462 0.0 13.1371    
cufflinks 5.5858 0.0 15.0706    
cufflinks 10.3498 0.0 27.6399   High
cufflinks 5.30718 0.0 14.3647    
cufflinks 6.54302 0.0 17.5495    
cufflinks 4.06444 0.0 11.2194    
cufflinks 4.78854 0.0 13.0415    
cufflinks 4.32619 0.0 11.8659    
cufflinks 2.958       High
cufflinks 2.032        
cufflinks 2.037        
cufflinks 2.288        
cufflinks 2.059        
cufflinks 2.18        
cufflinks 2.174        
cufflinks 1.446       Low
cufflinks 2.346        
cufflinks 2.463        
cufflinks 2.186        
cufflinks 2.219        
cufflinks 2.225        
cufflinks 2.142        
cufflinks 1.837       Low
cufflinks 2.176        
cufflinks 1.966        

0 Strain