Gene : Glyma.18G223300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13743:SF16 - PROTEIN T01H10.8 Genomic Order:  2233
Name:  ? Glyma.18G223300 Secondary Identifier:  ? PAC:30556092
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G223300 0.5kb upstream 0.5kb upstream 64507 true Chr18: 51002335-51066841 Glycine max
Glyma.18G223300 0.5kb upstream 0.5kb upstream 500 false Chr18: 51066342-51066841 Glycine max
Glyma.18G223300 0.5kb downstream 0.5kb downstream 64507 true Chr18: 51001835-51066341 Glycine max
Glyma.18G223300 0.5kb downstream 0.5kb downstream 500 false Chr18: 51001835-51002334 Glycine max
Glyma.18G223300 1.0kb upstream 1.0kb upstream 65007 true Chr18: 51002335-51067341 Glycine max
Glyma.18G223300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 51066342-51067341 Glycine max
Glyma.18G223300 1.0kb downstream 1.0kb downstream 65007 true Chr18: 51001335-51066341 Glycine max
Glyma.18G223300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 51001335-51002334 Glycine max
Glyma.18G223300 2.0kb upstream 2.0kb upstream 66007 true Chr18: 51002335-51068341 Glycine max
Glyma.18G223300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 51066342-51068341 Glycine max
Glyma.18G223300 2.0kb downstream 2.0kb downstream 66007 true Chr18: 51000335-51066341 Glycine max
Glyma.18G223300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 51000335-51002334 Glycine max
Glyma.18G223300 5.0kb upstream 5.0kb upstream 69007 true Chr18: 51002335-51071341 Glycine max
Glyma.18G223300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 51066342-51071341 Glycine max
Glyma.18G223300 5.0kb downstream 5.0kb downstream 69007 true Chr18: 50997335-51066341 Glycine max
Glyma.18G223300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 50997335-51002334 Glycine max
Glyma.18G223300 10.0kb upstream 10.0kb upstream 74007 true Chr18: 51002335-51076341 Glycine max
Glyma.18G223300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 51066342-51076341 Glycine max
Glyma.18G223300 10.0kb downstream 10.0kb downstream 74007 true Chr18: 50992335-51066341 Glycine max
Glyma.18G223300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 50992335-51002334 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308580 5265 Fabidae View MSA
124066229 5270 Rosid View MSA
123745367 5271 Pentapetalae View MSA
122791781 5272 Eudicot View MSA
122051109 5273 Angiosperm View MSA
121349597 5274 Embryophyte View MSA
123381372 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.65167 0.0 20.2119    
cufflinks 3.76976 0.0 13.0001   Low
cufflinks 3.50293 0.0 15.3912   Low
cufflinks 7.21503 0.0 45.1417   High
cufflinks 6.74284 0.0 24.9751   High
cufflinks 4.18086 0.0 12.5852    
cufflinks 5.95516 0.0 24.3126    
cufflinks 5.55268 0.0 30.6352    
cufflinks 5.38421 0.0 22.9327    
cufflinks 0.447       High
cufflinks 0.198       Low
cufflinks 0.236        
cufflinks 0.416       High
cufflinks 0.468       High
cufflinks 0.235        
cufflinks 0.247        
cufflinks 0.278        
cufflinks 0.365        
cufflinks 0.33        
cufflinks 0.256        
cufflinks 0.27        
cufflinks 0.283        
cufflinks 0.28        
cufflinks 0.227       Low
cufflinks 0.26        
cufflinks 0.321        

0 Strain