Gene : Glyma.18G224500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN Genomic Order:  2245
Name:  ? Glyma.18G224500 Secondary Identifier:  ? PAC:30555730
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G224500 0.5kb upstream 0.5kb upstream 19493 true Chr18: 51203136-51222628 Glycine max
Glyma.18G224500 0.5kb upstream 0.5kb upstream 500 false Chr18: 51222129-51222628 Glycine max
Glyma.18G224500 0.5kb downstream 0.5kb downstream 19493 true Chr18: 51202636-51222128 Glycine max
Glyma.18G224500 0.5kb downstream 0.5kb downstream 500 false Chr18: 51202636-51203135 Glycine max
Glyma.18G224500 1.0kb upstream 1.0kb upstream 19993 true Chr18: 51203136-51223128 Glycine max
Glyma.18G224500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 51222129-51223128 Glycine max
Glyma.18G224500 1.0kb downstream 1.0kb downstream 19993 true Chr18: 51202136-51222128 Glycine max
Glyma.18G224500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 51202136-51203135 Glycine max
Glyma.18G224500 2.0kb upstream 2.0kb upstream 20993 true Chr18: 51203136-51224128 Glycine max
Glyma.18G224500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 51222129-51224128 Glycine max
Glyma.18G224500 2.0kb downstream 2.0kb downstream 20993 true Chr18: 51201136-51222128 Glycine max
Glyma.18G224500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 51201136-51203135 Glycine max
Glyma.18G224500 5.0kb upstream 5.0kb upstream 23993 true Chr18: 51203136-51227128 Glycine max
Glyma.18G224500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 51222129-51227128 Glycine max
Glyma.18G224500 5.0kb downstream 5.0kb downstream 23993 true Chr18: 51198136-51222128 Glycine max
Glyma.18G224500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 51198136-51203135 Glycine max
Glyma.18G224500 10.0kb upstream 10.0kb upstream 28993 true Chr18: 51203136-51232128 Glycine max
Glyma.18G224500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 51222129-51232128 Glycine max
Glyma.18G224500 10.0kb downstream 10.0kb downstream 28993 true Chr18: 51193136-51222128 Glycine max
Glyma.18G224500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 51193136-51203135 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311356 5265 Fabidae View MSA
124073798 5270 Rosid View MSA
123750432 5271 Pentapetalae View MSA
122795311 5272 Eudicot View MSA
122042392 5273 Angiosperm View MSA
121309956 5274 Embryophyte View MSA
123347576 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.6193 0.0 101.076 High High
cufflinks 46.6328 0.0 182.155 High High
cufflinks 0.990164 0.0 6.05136    
cufflinks 0.160966 0.0 0.640828 Low Low
cufflinks 2.39349 0.0 12.8452    
cufflinks 3.44093 0.0 16.9394    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 8.34161 0.0 35.6662    
cufflinks 4.31925 0.0 19.7178    
cufflinks 0.419        
cufflinks 0.247        
cufflinks 0.051     Low Low
cufflinks 0.063     Low Low
cufflinks 0.244        
cufflinks 0.104       Low
cufflinks 1.508       High
cufflinks 0.278        
cufflinks 0.06     Low Low
cufflinks 1.836       High
cufflinks 1.635       High
cufflinks 0.308        
cufflinks 1.806       High
cufflinks 1.697       High
cufflinks 0.364        
cufflinks 1.739       High
cufflinks 0.438        

0 Strain