Gene : Glyma.18G217700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR17098 - NADH-UBIQUINONE OXIDOREDUCTASE MWFE SUBUNIT Genomic Order:  2177
Name:  ? Glyma.18G217700 Secondary Identifier:  ? PAC:30556626
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3781 Glycine max pathologic  
Gmax PWY-4302 Glycine max pathologic  
Gmax PWY-5083 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G217700 0.5kb upstream 0.5kb upstream 2946 true Chr18: 50483959-50486904 Glycine max
Glyma.18G217700 0.5kb upstream 0.5kb upstream 500 false Chr18: 50483959-50484458 Glycine max
Glyma.18G217700 0.5kb downstream 0.5kb downstream 2946 true Chr18: 50484459-50487404 Glycine max
Glyma.18G217700 0.5kb downstream 0.5kb downstream 500 false Chr18: 50486905-50487404 Glycine max
Glyma.18G217700 1.0kb upstream 1.0kb upstream 3446 true Chr18: 50483459-50486904 Glycine max
Glyma.18G217700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 50483459-50484458 Glycine max
Glyma.18G217700 1.0kb downstream 1.0kb downstream 3446 true Chr18: 50484459-50487904 Glycine max
Glyma.18G217700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 50486905-50487904 Glycine max
Glyma.18G217700 2.0kb upstream 2.0kb upstream 4446 true Chr18: 50482459-50486904 Glycine max
Glyma.18G217700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 50482459-50484458 Glycine max
Glyma.18G217700 2.0kb downstream 2.0kb downstream 4446 true Chr18: 50484459-50488904 Glycine max
Glyma.18G217700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 50486905-50488904 Glycine max
Glyma.18G217700 5.0kb upstream 5.0kb upstream 7446 true Chr18: 50479459-50486904 Glycine max
Glyma.18G217700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 50479459-50484458 Glycine max
Glyma.18G217700 5.0kb downstream 5.0kb downstream 7446 true Chr18: 50484459-50491904 Glycine max
Glyma.18G217700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 50486905-50491904 Glycine max
Glyma.18G217700 10.0kb upstream 10.0kb upstream 12446 true Chr18: 50474459-50486904 Glycine max
Glyma.18G217700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 50474459-50484458 Glycine max
Glyma.18G217700 10.0kb downstream 10.0kb downstream 12446 true Chr18: 50484459-50496904 Glycine max
Glyma.18G217700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 50486905-50496904 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026299 5273 Angiosperm View MSA
122299728 5265 Fabidae View MSA
124063685 5270 Rosid View MSA
123737855 5271 Pentapetalae View MSA
122792879 5272 Eudicot View MSA
121345909 5274 Embryophyte View MSA
123427209 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.4504 0.0 87.9612 High Low
cufflinks 43.0325 0.0 115.214 High  
cufflinks 32.0478 0.0 86.7339 High Low
cufflinks 40.5089 0.0 108.601 High  
cufflinks 55.4172 0.0 147.847 High  
cufflinks 83.9128 0.0 225.823 High High
cufflinks 48.3456 0.0 129.117 High  
cufflinks 49.5706 0.0 132.316 High  
cufflinks 55.8053 0.0 148.881 High  
cufflinks 21.7     High High
cufflinks 7.642     High Low
cufflinks 13.123     High  
cufflinks 23.794     High High
cufflinks 29.116     High High
cufflinks 9.013     High  
cufflinks 11.554     High  
cufflinks 8.419     High Low
cufflinks 19.198     High High
cufflinks 13.201     High  
cufflinks 9.438     High  
cufflinks 10.086     High  
cufflinks 10.918     High  
cufflinks 12.104     High  
cufflinks 10.175     High  
cufflinks 11.655     High  
cufflinks 11.841     High  

0 Strain