Gene : Glyma.18G209600 G. max Wm82.a2.v1
Defline:  (1 of 2) 6.3.2.4 - D-alanine--D-alanine ligase / D-alanylalanine synthetase Genomic Order:  2096
Name:  ? Glyma.18G209600 Secondary Identifier:  ? PAC:30557784
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G209600 0.5kb upstream 0.5kb upstream 18772 true Chr18: 49454002-49472773 Glycine max
Glyma.18G209600 0.5kb upstream 0.5kb upstream 500 false Chr18: 49472274-49472773 Glycine max
Glyma.18G209600 0.5kb downstream 0.5kb downstream 18772 true Chr18: 49453502-49472273 Glycine max
Glyma.18G209600 0.5kb downstream 0.5kb downstream 500 false Chr18: 49453502-49454001 Glycine max
Glyma.18G209600 1.0kb upstream 1.0kb upstream 19272 true Chr18: 49454002-49473273 Glycine max
Glyma.18G209600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 49472274-49473273 Glycine max
Glyma.18G209600 1.0kb downstream 1.0kb downstream 19272 true Chr18: 49453002-49472273 Glycine max
Glyma.18G209600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 49453002-49454001 Glycine max
Glyma.18G209600 2.0kb upstream 2.0kb upstream 20272 true Chr18: 49454002-49474273 Glycine max
Glyma.18G209600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 49472274-49474273 Glycine max
Glyma.18G209600 2.0kb downstream 2.0kb downstream 20272 true Chr18: 49452002-49472273 Glycine max
Glyma.18G209600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 49452002-49454001 Glycine max
Glyma.18G209600 5.0kb upstream 5.0kb upstream 23272 true Chr18: 49454002-49477273 Glycine max
Glyma.18G209600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 49472274-49477273 Glycine max
Glyma.18G209600 5.0kb downstream 5.0kb downstream 23272 true Chr18: 49449002-49472273 Glycine max
Glyma.18G209600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 49449002-49454001 Glycine max
Glyma.18G209600 10.0kb upstream 10.0kb upstream 28272 true Chr18: 49454002-49482273 Glycine max
Glyma.18G209600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 49472274-49482273 Glycine max
Glyma.18G209600 10.0kb downstream 10.0kb downstream 28272 true Chr18: 49444002-49472273 Glycine max
Glyma.18G209600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 49444002-49454001 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304418 5265 Fabidae View MSA
124074775 5270 Rosid View MSA
123747604 5271 Pentapetalae View MSA
122787402 5272 Eudicot View MSA
122042671 5273 Angiosperm View MSA
121345291 5274 Embryophyte View MSA
123380188 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.27395 0.0 4.06388    
cufflinks 0.387981 0.0 1.39929   Low
cufflinks 0.581797 0.0 2.03165    
cufflinks 1.53254 0.0 4.75414    
cufflinks 2.83165 0.0 8.10646    
cufflinks 1.67236 0.0 5.13288    
cufflinks 4.1593 0.0 11.4552   High
cufflinks 0.5271 0.0 1.85777   Low
cufflinks 3.05344 0.0 8.65608    
cufflinks 0.258        
cufflinks 0.311        
cufflinks 0.151        
cufflinks 0.841       High
cufflinks 0.4        
cufflinks 0.111       Low
cufflinks 0.132        
cufflinks 1.037       High
cufflinks 0.153        
cufflinks 0.146        
cufflinks 0.126       Low
cufflinks 0.458        
cufflinks 0.159        
cufflinks 0.173        
cufflinks 0.452        
cufflinks 0.163        
cufflinks 0.608       High

0 Strain