Gene : Glyma.18G213900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR30053:SF3 - ELONGATION FACTOR EF-P Genomic Order:  2139
Name:  ? Glyma.18G213900 Secondary Identifier:  ? PAC:30558748
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G213900 0.5kb upstream 0.5kb upstream 4332 true Chr18: 50082939-50087270 Glycine max
Glyma.18G213900 0.5kb upstream 0.5kb upstream 500 false Chr18: 50086771-50087270 Glycine max
Glyma.18G213900 0.5kb downstream 0.5kb downstream 4332 true Chr18: 50082439-50086770 Glycine max
Glyma.18G213900 0.5kb downstream 0.5kb downstream 500 false Chr18: 50082439-50082938 Glycine max
Glyma.18G213900 1.0kb upstream 1.0kb upstream 4832 true Chr18: 50082939-50087770 Glycine max
Glyma.18G213900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 50086771-50087770 Glycine max
Glyma.18G213900 1.0kb downstream 1.0kb downstream 4832 true Chr18: 50081939-50086770 Glycine max
Glyma.18G213900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 50081939-50082938 Glycine max
Glyma.18G213900 2.0kb upstream 2.0kb upstream 5832 true Chr18: 50082939-50088770 Glycine max
Glyma.18G213900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 50086771-50088770 Glycine max
Glyma.18G213900 2.0kb downstream 2.0kb downstream 5832 true Chr18: 50080939-50086770 Glycine max
Glyma.18G213900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 50080939-50082938 Glycine max
Glyma.18G213900 5.0kb upstream 5.0kb upstream 8832 true Chr18: 50082939-50091770 Glycine max
Glyma.18G213900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 50086771-50091770 Glycine max
Glyma.18G213900 5.0kb downstream 5.0kb downstream 8832 true Chr18: 50077939-50086770 Glycine max
Glyma.18G213900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 50077939-50082938 Glycine max
Glyma.18G213900 10.0kb upstream 10.0kb upstream 13832 true Chr18: 50082939-50096770 Glycine max
Glyma.18G213900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 50086771-50096770 Glycine max
Glyma.18G213900 10.0kb downstream 10.0kb downstream 13832 true Chr18: 50072939-50086770 Glycine max
Glyma.18G213900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 50072939-50082938 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303402 5265 Fabidae View MSA
124067724 5270 Rosid View MSA
123738931 5271 Pentapetalae View MSA
122789538 5272 Eudicot View MSA
122051510 5273 Angiosperm View MSA
121347345 5274 Embryophyte View MSA
123424551 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.6382 0.0 42.4824   High
cufflinks 13.9843 0.0 38.255   High
cufflinks 4.52376 0.0 14.1291   Low
cufflinks 7.93572 0.0 22.9741    
cufflinks 6.14454 0.0 18.4058    
cufflinks 6.59233 0.0 19.5258    
cufflinks 11.3687 0.0 31.6909    
cufflinks 6.52673 0.0 19.3655    
cufflinks 7.46661 0.0 21.7817    
cufflinks 2.588        
cufflinks 0.679       Low
cufflinks 2.311        
cufflinks 1.679        
cufflinks 1.969        
cufflinks 1.524        
cufflinks 12.873     High High
cufflinks 1.168        
cufflinks 2.289        
cufflinks 3.875        
cufflinks 12.643     High High
cufflinks 0.706       Low
cufflinks 10.87     High High
cufflinks 13.213     High High
cufflinks 0.756       Low
cufflinks 13.523     High High
cufflinks 1.068        

0 Strain