Gene : Glyma.18G204700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12565//PTHR12565:SF167 - STEROL REGULATORY ELEMENT-BINDING PROTEIN Genomic Order:  2047
Name:  ? Glyma.18G204700 Secondary Identifier:  ? PAC:30555914
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G204700 0.5kb upstream 0.5kb upstream 1031 true Chr18: 48794503-48795533 Glycine max
Glyma.18G204700 0.5kb upstream 0.5kb upstream 500 false Chr18: 48795034-48795533 Glycine max
Glyma.18G204700 0.5kb downstream 0.5kb downstream 1031 true Chr18: 48794003-48795033 Glycine max
Glyma.18G204700 0.5kb downstream 0.5kb downstream 500 false Chr18: 48794003-48794502 Glycine max
Glyma.18G204700 1.0kb upstream 1.0kb upstream 1531 true Chr18: 48794503-48796033 Glycine max
Glyma.18G204700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 48795034-48796033 Glycine max
Glyma.18G204700 1.0kb downstream 1.0kb downstream 1531 true Chr18: 48793503-48795033 Glycine max
Glyma.18G204700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 48793503-48794502 Glycine max
Glyma.18G204700 2.0kb upstream 2.0kb upstream 2531 true Chr18: 48794503-48797033 Glycine max
Glyma.18G204700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 48795034-48797033 Glycine max
Glyma.18G204700 2.0kb downstream 2.0kb downstream 2531 true Chr18: 48792503-48795033 Glycine max
Glyma.18G204700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 48792503-48794502 Glycine max
Glyma.18G204700 5.0kb upstream 5.0kb upstream 5531 true Chr18: 48794503-48800033 Glycine max
Glyma.18G204700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 48795034-48800033 Glycine max
Glyma.18G204700 5.0kb downstream 5.0kb downstream 5531 true Chr18: 48789503-48795033 Glycine max
Glyma.18G204700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 48789503-48794502 Glycine max
Glyma.18G204700 10.0kb upstream 10.0kb upstream 10531 true Chr18: 48794503-48805033 Glycine max
Glyma.18G204700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 48795034-48805033 Glycine max
Glyma.18G204700 10.0kb downstream 10.0kb downstream 10531 true Chr18: 48784503-48795033 Glycine max
Glyma.18G204700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 48784503-48794502 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309446 5265 Fabidae View MSA
124062261 5270 Rosid View MSA
123745456 5271 Pentapetalae View MSA
122795730 5272 Eudicot View MSA
122049789 5273 Angiosperm View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.103267 0.0 0.441085 Low  
cufflinks 0.131674 0.0 0.551203 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0861647 0.0 0.372052 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.159        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.111     Low  
cufflinks 0.178       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain