Gene : Glyma.18G239300 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10994:SF70 - RETICULON-LIKE PROTEIN B4 Genomic Order:  2393
Name:  ? Glyma.18G239300 Secondary Identifier:  ? PAC:30554617
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G239300 0.5kb upstream 0.5kb upstream 2934 true Chr18: 52810679-52813612 Glycine max
Glyma.18G239300 0.5kb upstream 0.5kb upstream 500 false Chr18: 52813113-52813612 Glycine max
Glyma.18G239300 0.5kb downstream 0.5kb downstream 2934 true Chr18: 52810179-52813112 Glycine max
Glyma.18G239300 0.5kb downstream 0.5kb downstream 500 false Chr18: 52810179-52810678 Glycine max
Glyma.18G239300 1.0kb upstream 1.0kb upstream 3434 true Chr18: 52810679-52814112 Glycine max
Glyma.18G239300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 52813113-52814112 Glycine max
Glyma.18G239300 1.0kb downstream 1.0kb downstream 3434 true Chr18: 52809679-52813112 Glycine max
Glyma.18G239300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 52809679-52810678 Glycine max
Glyma.18G239300 2.0kb upstream 2.0kb upstream 4434 true Chr18: 52810679-52815112 Glycine max
Glyma.18G239300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 52813113-52815112 Glycine max
Glyma.18G239300 2.0kb downstream 2.0kb downstream 4434 true Chr18: 52808679-52813112 Glycine max
Glyma.18G239300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 52808679-52810678 Glycine max
Glyma.18G239300 5.0kb upstream 5.0kb upstream 7434 true Chr18: 52810679-52818112 Glycine max
Glyma.18G239300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 52813113-52818112 Glycine max
Glyma.18G239300 5.0kb downstream 5.0kb downstream 7434 true Chr18: 52805679-52813112 Glycine max
Glyma.18G239300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 52805679-52810678 Glycine max
Glyma.18G239300 10.0kb upstream 10.0kb upstream 12434 true Chr18: 52810679-52823112 Glycine max
Glyma.18G239300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 52813113-52823112 Glycine max
Glyma.18G239300 10.0kb downstream 10.0kb downstream 12434 true Chr18: 52800679-52813112 Glycine max
Glyma.18G239300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 52800679-52810678 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312395 5265 Fabidae View MSA
124069227 5270 Rosid View MSA
123749221 5271 Pentapetalae View MSA
122790829 5272 Eudicot View MSA
122049511 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.3297 0.0 97.5179 High Low
cufflinks 62.0975 0.0 172.895 High  
cufflinks 36.9385 0.0 99.2457 High Low
cufflinks 52.7744 0.0 144.779 High  
cufflinks 48.9368 0.0 133.605 High  
cufflinks 37.0427 0.0 99.6199 High Low
cufflinks 85.8268 0.0 248.126 High High
cufflinks 76.2876 0.0 217.284 High High
cufflinks 46.2805 0.0 125.939 High  
cufflinks 30.91     High High
cufflinks 3.92       Low
cufflinks 18.005     High  
cufflinks 20.503     High  
cufflinks 24.162     High  
cufflinks 7.526     High Low
cufflinks 14.758     High  
cufflinks 12.862     High  
cufflinks 21.061     High  
cufflinks 27.539     High High
cufflinks 18.917     High  
cufflinks 6.889     High Low
cufflinks 17.53     High  
cufflinks 22.239     High  
cufflinks 6.229     High Low
cufflinks 17.834     High  
cufflinks 8.581     High  

0 Strain