Gene : Glyma.18G239800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11926:SF308 - STEROL 3-BETA-GLUCOSYLTRANSFERASE UGT80A2 Genomic Order:  2398
Name:  ? Glyma.18G239800 Secondary Identifier:  ? PAC:30556988
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G239800 0.5kb upstream 0.5kb upstream 8904 true Chr18: 52849380-52858283 Glycine max
Glyma.18G239800 0.5kb upstream 0.5kb upstream 500 false Chr18: 52849380-52849879 Glycine max
Glyma.18G239800 0.5kb downstream 0.5kb downstream 8904 true Chr18: 52849880-52858783 Glycine max
Glyma.18G239800 0.5kb downstream 0.5kb downstream 500 false Chr18: 52858284-52858783 Glycine max
Glyma.18G239800 1.0kb upstream 1.0kb upstream 9404 true Chr18: 52848880-52858283 Glycine max
Glyma.18G239800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 52848880-52849879 Glycine max
Glyma.18G239800 1.0kb downstream 1.0kb downstream 9404 true Chr18: 52849880-52859283 Glycine max
Glyma.18G239800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 52858284-52859283 Glycine max
Glyma.18G239800 2.0kb upstream 2.0kb upstream 10404 true Chr18: 52847880-52858283 Glycine max
Glyma.18G239800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 52847880-52849879 Glycine max
Glyma.18G239800 2.0kb downstream 2.0kb downstream 10404 true Chr18: 52849880-52860283 Glycine max
Glyma.18G239800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 52858284-52860283 Glycine max
Glyma.18G239800 5.0kb upstream 5.0kb upstream 13404 true Chr18: 52844880-52858283 Glycine max
Glyma.18G239800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 52844880-52849879 Glycine max
Glyma.18G239800 5.0kb downstream 5.0kb downstream 13404 true Chr18: 52849880-52863283 Glycine max
Glyma.18G239800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 52858284-52863283 Glycine max
Glyma.18G239800 10.0kb upstream 10.0kb upstream 18404 true Chr18: 52839880-52858283 Glycine max
Glyma.18G239800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 52839880-52849879 Glycine max
Glyma.18G239800 10.0kb downstream 10.0kb downstream 18404 true Chr18: 52849880-52868283 Glycine max
Glyma.18G239800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 52858284-52868283 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310910 5265 Fabidae View MSA
124064362 5270 Rosid View MSA
123751463 5271 Pentapetalae View MSA
122789522 5272 Eudicot View MSA
122051412 5273 Angiosperm View MSA
121349379 5274 Embryophyte View MSA
123425630 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.428836 0.0 2.67311   Low
cufflinks 1.86129 0.0 9.22222    
cufflinks 1.79542 0.0 12.0094    
cufflinks 1.72191 0.0 9.77825    
cufflinks 1.8438 0.0 12.3394    
cufflinks 1.17669 0.0 7.65696    
cufflinks 8.08614 0.0 29.4738   High
cufflinks 1.88546 0.0 12.4705    
cufflinks 1.37372 0.0 8.56371    
cufflinks 0.066     Low  
cufflinks 0.038     Low  
cufflinks 0.114     Low High
cufflinks 0.08     Low  
cufflinks 0.078        
cufflinks 0.012     Low Low
cufflinks 0.041     Low  
cufflinks 0.046     Low  
cufflinks 0.15       High
cufflinks 0.105       High
cufflinks 0.03     Low  
cufflinks 0.055     Low  
cufflinks 0.038     Low  
cufflinks 0.049     Low  
cufflinks 0.057     Low  
cufflinks 0.033     Low  
cufflinks 0.047     Low  

0 Strain