Gene : Glyma.01G214400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31867:SF2 - EXPANSIN-A18-RELATED Genomic Order:  2144
Name:  ? Glyma.01G214400 Secondary Identifier:  ? PAC:30543163
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G214400 0.5kb upstream 0.5kb upstream 2165 true Chr01: 54540303-54542467 Glycine max
Glyma.01G214400 0.5kb upstream 0.5kb upstream 500 false Chr01: 54540303-54540802 Glycine max
Glyma.01G214400 0.5kb downstream 0.5kb downstream 2165 true Chr01: 54540803-54542967 Glycine max
Glyma.01G214400 0.5kb downstream 0.5kb downstream 500 false Chr01: 54542468-54542967 Glycine max
Glyma.01G214400 1.0kb upstream 1.0kb upstream 2665 true Chr01: 54539803-54542467 Glycine max
Glyma.01G214400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54539803-54540802 Glycine max
Glyma.01G214400 1.0kb downstream 1.0kb downstream 2665 true Chr01: 54540803-54543467 Glycine max
Glyma.01G214400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54542468-54543467 Glycine max
Glyma.01G214400 2.0kb upstream 2.0kb upstream 3665 true Chr01: 54538803-54542467 Glycine max
Glyma.01G214400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54538803-54540802 Glycine max
Glyma.01G214400 2.0kb downstream 2.0kb downstream 3665 true Chr01: 54540803-54544467 Glycine max
Glyma.01G214400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54542468-54544467 Glycine max
Glyma.01G214400 5.0kb upstream 5.0kb upstream 6665 true Chr01: 54535803-54542467 Glycine max
Glyma.01G214400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54535803-54540802 Glycine max
Glyma.01G214400 5.0kb downstream 5.0kb downstream 6665 true Chr01: 54540803-54547467 Glycine max
Glyma.01G214400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54542468-54547467 Glycine max
Glyma.01G214400 10.0kb upstream 10.0kb upstream 11665 true Chr01: 54530803-54542467 Glycine max
Glyma.01G214400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54530803-54540802 Glycine max
Glyma.01G214400 10.0kb downstream 10.0kb downstream 11665 true Chr01: 54540803-54552467 Glycine max
Glyma.01G214400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54542468-54552467 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307697 5265 Fabidae View MSA
124063240 5270 Rosid View MSA
123741692 5271 Pentapetalae View MSA
122790140 5272 Eudicot View MSA
122043429 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121310122 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0219693 0.0 0.0993565 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 7.72557 0.0 22.771    
cufflinks 827.844 0.0 3971.18 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 11.211 0.0 31.6546    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.14        
cufflinks 0.01     Low Low
cufflinks 28.841     High High
cufflinks 3.713       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.315        
cufflinks 0.016     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.368        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 0.202        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.938        

0 Strain