Gene : Glyma.01G218000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31775:SF5 - REMORIN FAMILY PROTEIN-RELATED Genomic Order:  2180
Name:  ? Glyma.01G218000 Secondary Identifier:  ? PAC:30542528
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G218000 0.5kb upstream 0.5kb upstream 3236 true Chr01: 54802697-54805932 Glycine max
Glyma.01G218000 0.5kb upstream 0.5kb upstream 500 false Chr01: 54805433-54805932 Glycine max
Glyma.01G218000 0.5kb downstream 0.5kb downstream 3236 true Chr01: 54802197-54805432 Glycine max
Glyma.01G218000 0.5kb downstream 0.5kb downstream 500 false Chr01: 54802197-54802696 Glycine max
Glyma.01G218000 1.0kb upstream 1.0kb upstream 3736 true Chr01: 54802697-54806432 Glycine max
Glyma.01G218000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54805433-54806432 Glycine max
Glyma.01G218000 1.0kb downstream 1.0kb downstream 3736 true Chr01: 54801697-54805432 Glycine max
Glyma.01G218000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54801697-54802696 Glycine max
Glyma.01G218000 2.0kb upstream 2.0kb upstream 4736 true Chr01: 54802697-54807432 Glycine max
Glyma.01G218000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54805433-54807432 Glycine max
Glyma.01G218000 2.0kb downstream 2.0kb downstream 4736 true Chr01: 54800697-54805432 Glycine max
Glyma.01G218000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54800697-54802696 Glycine max
Glyma.01G218000 5.0kb upstream 5.0kb upstream 7736 true Chr01: 54802697-54810432 Glycine max
Glyma.01G218000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54805433-54810432 Glycine max
Glyma.01G218000 5.0kb downstream 5.0kb downstream 7736 true Chr01: 54797697-54805432 Glycine max
Glyma.01G218000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54797697-54802696 Glycine max
Glyma.01G218000 10.0kb upstream 10.0kb upstream 12736 true Chr01: 54802697-54815432 Glycine max
Glyma.01G218000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54805433-54815432 Glycine max
Glyma.01G218000 10.0kb downstream 10.0kb downstream 12736 true Chr01: 54792697-54805432 Glycine max
Glyma.01G218000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54792697-54802696 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782120 5273 Angiosperm View MSA
122314158 5265 Fabidae View MSA
124051476 5270 Rosid View MSA
123751928 5271 Pentapetalae View MSA
122774257 5272 Eudicot View MSA
121351512 5274 Embryophyte View MSA
123382200 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.594981 0.0 3.00143    
cufflinks 1.19636 0.0 5.48143    
cufflinks 0.658876 0.0 4.38412    
cufflinks 5.45882 0.0 23.0757   High
cufflinks 0.0592824 0.0 0.254701 Low Low
cufflinks 0.825275 0.0 5.26691    
cufflinks 1.91978 0.0 10.8893    
cufflinks 1.66104 0.0 9.91739    
cufflinks 0.4544 0.0 2.18755    
cufflinks 0.505       High
cufflinks 0.209        
cufflinks 0.097     Low  
cufflinks 0.08     Low  
cufflinks 0.013     Low Low
cufflinks 0.068        
cufflinks 0.201        
cufflinks 0.088        
cufflinks 0.227        
cufflinks 0.325        
cufflinks 0.193        
cufflinks 0.197        
cufflinks 0.206        
cufflinks 0.47       High
cufflinks 0.063        
cufflinks 0.27        
cufflinks 0.161        

0 Strain