Gene : Glyma.01G214100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12357:SF32 - YTH FAMILY PROTEIN Genomic Order:  2141
Name:  ? Glyma.01G214100 Secondary Identifier:  ? PAC:30544283
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G214100 0.5kb upstream 0.5kb upstream 4966 true Chr01: 54514432-54519397 Glycine max
Glyma.01G214100 0.5kb upstream 0.5kb upstream 500 false Chr01: 54518898-54519397 Glycine max
Glyma.01G214100 0.5kb downstream 0.5kb downstream 4966 true Chr01: 54513932-54518897 Glycine max
Glyma.01G214100 0.5kb downstream 0.5kb downstream 500 false Chr01: 54513932-54514431 Glycine max
Glyma.01G214100 1.0kb upstream 1.0kb upstream 5466 true Chr01: 54514432-54519897 Glycine max
Glyma.01G214100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54518898-54519897 Glycine max
Glyma.01G214100 1.0kb downstream 1.0kb downstream 5466 true Chr01: 54513432-54518897 Glycine max
Glyma.01G214100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54513432-54514431 Glycine max
Glyma.01G214100 2.0kb upstream 2.0kb upstream 6466 true Chr01: 54514432-54520897 Glycine max
Glyma.01G214100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54518898-54520897 Glycine max
Glyma.01G214100 2.0kb downstream 2.0kb downstream 6466 true Chr01: 54512432-54518897 Glycine max
Glyma.01G214100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54512432-54514431 Glycine max
Glyma.01G214100 5.0kb upstream 5.0kb upstream 9466 true Chr01: 54514432-54523897 Glycine max
Glyma.01G214100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54518898-54523897 Glycine max
Glyma.01G214100 5.0kb downstream 5.0kb downstream 9466 true Chr01: 54509432-54518897 Glycine max
Glyma.01G214100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54509432-54514431 Glycine max
Glyma.01G214100 10.0kb upstream 10.0kb upstream 14466 true Chr01: 54514432-54528897 Glycine max
Glyma.01G214100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54518898-54528897 Glycine max
Glyma.01G214100 10.0kb downstream 10.0kb downstream 14466 true Chr01: 54504432-54518897 Glycine max
Glyma.01G214100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54504432-54514431 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305122 5265 Fabidae View MSA
124062891 5270 Rosid View MSA
123739575 5271 Pentapetalae View MSA
122769957 5272 Eudicot View MSA
122045860 5273 Angiosperm View MSA
121348539 5274 Embryophyte View MSA
123380904 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.4213 0.0 70.342   High
cufflinks 13.4039 0.0 57.1088    
cufflinks 19.0944 0.0 86.6671   High
cufflinks 9.42236 0.0 45.4667    
cufflinks 5.15357 0.0 33.9001   Low
cufflinks 6.05055 0.0 34.4731    
cufflinks 6.6021 0.0 29.2356    
cufflinks 8.70114 0.0 42.0506    
cufflinks 6.48328 0.0 34.7051    
cufflinks 0.516        
cufflinks 0.464        
cufflinks 0.956        
cufflinks 0.329       Low
cufflinks 0.301       Low
cufflinks 0.512        
cufflinks 1.776       High
cufflinks 0.289       Low
cufflinks 0.781        
cufflinks 0.967        
cufflinks 2.156       High
cufflinks 0.397        
cufflinks 1.874       High
cufflinks 1.445        
cufflinks 0.472        
cufflinks 2.026       High
cufflinks 0.323       Low

0 Strain