Gene : Glyma.01G219700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33317:SF1 - POLYNUCLEOTIDYL TRANSFERASE/ RIBONUCLEASE H-LIKE PROTEIN Genomic Order:  2197
Name:  ? Glyma.01G219700 Secondary Identifier:  ? PAC:30542628
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G219700 0.5kb upstream 0.5kb upstream 3578 true Chr01: 54908697-54912274 Glycine max
Glyma.01G219700 0.5kb upstream 0.5kb upstream 500 false Chr01: 54911775-54912274 Glycine max
Glyma.01G219700 0.5kb downstream 0.5kb downstream 3578 true Chr01: 54908197-54911774 Glycine max
Glyma.01G219700 0.5kb downstream 0.5kb downstream 500 false Chr01: 54908197-54908696 Glycine max
Glyma.01G219700 1.0kb upstream 1.0kb upstream 4078 true Chr01: 54908697-54912774 Glycine max
Glyma.01G219700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54911775-54912774 Glycine max
Glyma.01G219700 1.0kb downstream 1.0kb downstream 4078 true Chr01: 54907697-54911774 Glycine max
Glyma.01G219700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54907697-54908696 Glycine max
Glyma.01G219700 2.0kb upstream 2.0kb upstream 5078 true Chr01: 54908697-54913774 Glycine max
Glyma.01G219700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54911775-54913774 Glycine max
Glyma.01G219700 2.0kb downstream 2.0kb downstream 5078 true Chr01: 54906697-54911774 Glycine max
Glyma.01G219700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54906697-54908696 Glycine max
Glyma.01G219700 5.0kb upstream 5.0kb upstream 8078 true Chr01: 54908697-54916774 Glycine max
Glyma.01G219700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54911775-54916774 Glycine max
Glyma.01G219700 5.0kb downstream 5.0kb downstream 8078 true Chr01: 54903697-54911774 Glycine max
Glyma.01G219700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54903697-54908696 Glycine max
Glyma.01G219700 10.0kb upstream 10.0kb upstream 13078 true Chr01: 54908697-54921774 Glycine max
Glyma.01G219700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54911775-54921774 Glycine max
Glyma.01G219700 10.0kb downstream 10.0kb downstream 13078 true Chr01: 54898697-54911774 Glycine max
Glyma.01G219700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54898697-54908696 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312334 5265 Fabidae View MSA
124067279 5270 Rosid View MSA
123746369 5271 Pentapetalae View MSA
122785614 5272 Eudicot View MSA
122048036 5273 Angiosperm View MSA
121349861 5274 Embryophyte View MSA
123381473 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.94335 0.0 36.7206    
cufflinks 9.26138 0.0 64.3729   High
cufflinks 4.66774 0.0 31.6993   Low
cufflinks 5.91787 0.0 38.1934    
cufflinks 6.0952 0.0 33.2795    
cufflinks 4.40679 0.0 20.5622   Low
cufflinks 9.62372 0.0 52.4091   High
cufflinks 5.19071 0.0 34.1507    
cufflinks 5.98259 0.0 35.359    
cufflinks 0.337        
cufflinks 0.128       Low
cufflinks 0.441        
cufflinks 0.335        
cufflinks 0.557       High
cufflinks 0.195        
cufflinks 0.33        
cufflinks 0.185        
cufflinks 0.6       High
cufflinks 0.757       High
cufflinks 0.261        
cufflinks 0.161       Low
cufflinks 0.317        
cufflinks 0.447        
cufflinks 0.173        
cufflinks 0.272        
cufflinks 0.137       Low

0 Strain