Gene : Glyma.01G243100 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11785//PTHR11785:SF366 - AMINO ACID TRANSPORTER Genomic Order:  2431
Name:  ? Glyma.01G243100 Secondary Identifier:  ? PAC:30543376
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G243100 0.5kb upstream 0.5kb upstream 2488 true Chr01: 56614351-56616838 Glycine max
Glyma.01G243100 0.5kb upstream 0.5kb upstream 500 false Chr01: 56614351-56614850 Glycine max
Glyma.01G243100 0.5kb downstream 0.5kb downstream 2488 true Chr01: 56614851-56617338 Glycine max
Glyma.01G243100 0.5kb downstream 0.5kb downstream 500 false Chr01: 56616839-56617338 Glycine max
Glyma.01G243100 1.0kb upstream 1.0kb upstream 2988 true Chr01: 56613851-56616838 Glycine max
Glyma.01G243100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 56613851-56614850 Glycine max
Glyma.01G243100 1.0kb downstream 1.0kb downstream 2988 true Chr01: 56614851-56617838 Glycine max
Glyma.01G243100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 56616839-56617838 Glycine max
Glyma.01G243100 2.0kb upstream 2.0kb upstream 3988 true Chr01: 56612851-56616838 Glycine max
Glyma.01G243100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 56612851-56614850 Glycine max
Glyma.01G243100 2.0kb downstream 2.0kb downstream 3988 true Chr01: 56614851-56618838 Glycine max
Glyma.01G243100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 56616839-56618838 Glycine max
Glyma.01G243100 5.0kb upstream 5.0kb upstream 6988 true Chr01: 56609851-56616838 Glycine max
Glyma.01G243100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 56609851-56614850 Glycine max
Glyma.01G243100 5.0kb downstream 5.0kb downstream 6988 true Chr01: 56614851-56621838 Glycine max
Glyma.01G243100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 56616839-56621838 Glycine max
Glyma.01G243100 10.0kb upstream 10.0kb upstream 11988 true Chr01: 56604851-56616838 Glycine max
Glyma.01G243100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 56604851-56614850 Glycine max
Glyma.01G243100 10.0kb downstream 10.0kb downstream 11988 true Chr01: 56614851-56626838 Glycine max
Glyma.01G243100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 56616839-56626838 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303318 5265 Fabidae View MSA
124068047 5270 Rosid View MSA
123738563 5271 Pentapetalae View MSA
122792232 5272 Eudicot View MSA
122042017 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.54483 0.0 18.4657   High
cufflinks 3.99296 0.0 11.9759    
cufflinks 2.31485 0.0 7.48718   Low
cufflinks 6.29395 0.0 17.821    
cufflinks 5.85805 0.0 16.7163    
cufflinks 3.23077 0.0 9.9518    
cufflinks 4.43358 0.0 13.1073    
cufflinks 6.05129 0.0 17.1864    
cufflinks 3.50565 0.0 10.6855    
cufflinks 4.199        
cufflinks 0.387       Low
cufflinks 2.936        
cufflinks 4.607        
cufflinks 7.011     High High
cufflinks 0.56       Low
cufflinks 3.523        
cufflinks 1.003        
cufflinks 4.229        
cufflinks 4.325        
cufflinks 4.065        
cufflinks 0.386       Low
cufflinks 4.122        
cufflinks 4.222        
cufflinks 1.031        
cufflinks 3.476        
cufflinks 0.534       Low

0 Strain