Gene : Glyma.01G233300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11851:SF152 - PROTEIN UCR-2.3 Genomic Order:  2333
Name:  ? Glyma.01G233300 Secondary Identifier:  ? PAC:30544702
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G233300 0.5kb upstream 0.5kb upstream 14286 true Chr01: 55954681-55968966 Glycine max
Glyma.01G233300 0.5kb upstream 0.5kb upstream 500 false Chr01: 55954681-55955180 Glycine max
Glyma.01G233300 0.5kb downstream 0.5kb downstream 14286 true Chr01: 55955181-55969466 Glycine max
Glyma.01G233300 0.5kb downstream 0.5kb downstream 500 false Chr01: 55968967-55969466 Glycine max
Glyma.01G233300 1.0kb upstream 1.0kb upstream 14786 true Chr01: 55954181-55968966 Glycine max
Glyma.01G233300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 55954181-55955180 Glycine max
Glyma.01G233300 1.0kb downstream 1.0kb downstream 14786 true Chr01: 55955181-55969966 Glycine max
Glyma.01G233300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 55968967-55969966 Glycine max
Glyma.01G233300 2.0kb upstream 2.0kb upstream 15786 true Chr01: 55953181-55968966 Glycine max
Glyma.01G233300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 55953181-55955180 Glycine max
Glyma.01G233300 2.0kb downstream 2.0kb downstream 15786 true Chr01: 55955181-55970966 Glycine max
Glyma.01G233300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 55968967-55970966 Glycine max
Glyma.01G233300 5.0kb upstream 5.0kb upstream 18786 true Chr01: 55950181-55968966 Glycine max
Glyma.01G233300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 55950181-55955180 Glycine max
Glyma.01G233300 5.0kb downstream 5.0kb downstream 18786 true Chr01: 55955181-55973966 Glycine max
Glyma.01G233300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55968967-55973966 Glycine max
Glyma.01G233300 10.0kb upstream 10.0kb upstream 23786 true Chr01: 55945181-55968966 Glycine max
Glyma.01G233300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 55945181-55955180 Glycine max
Glyma.01G233300 10.0kb downstream 10.0kb downstream 23786 true Chr01: 55955181-55978966 Glycine max
Glyma.01G233300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55968967-55978966 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307576 5265 Fabidae View MSA
124063909 5270 Rosid View MSA
123737862 5271 Pentapetalae View MSA
122791409 5272 Eudicot View MSA
122044944 5273 Angiosperm View MSA
121346655 5274 Embryophyte View MSA
123428815 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.0266 0.0 118.762 High High
cufflinks 9.11999 0.0 24.4379    
cufflinks 32.7777 0.0 100.326 High High
cufflinks 10.3531 0.0 27.8806    
cufflinks 9.51296 0.0 25.5135    
cufflinks 6.02542 0.0 16.0884   Low
cufflinks 9.32323 0.0 24.9878    
cufflinks 11.3153 0.0 30.598    
cufflinks 9.27458 0.0 24.8634    
cufflinks 3.016       Low
cufflinks 4.985        
cufflinks 11.56     High High
cufflinks 3.535        
cufflinks 3.794        
cufflinks 4.97        
cufflinks 5.099        
cufflinks 2.791       Low
cufflinks 8.149     High High
cufflinks 4.126        
cufflinks 6.152        
cufflinks 4.374        
cufflinks 6.452        
cufflinks 5.919        
cufflinks 5.63        
cufflinks 5.806        
cufflinks 3.862        

0 Strain