Gene : Glyma.01G005000 G. max Wm82.a2.v1
Defline:  (1 of 16) KOG1595 - CCCH-type Zn-finger protein Genomic Order:  50
Name:  ? Glyma.01G005000 Secondary Identifier:  ? PAC:30544277
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G005000 0.5kb upstream 0.5kb upstream 2541 true Chr01: 464509-467049 Glycine max
Glyma.01G005000 0.5kb upstream 0.5kb upstream 500 false Chr01: 466550-467049 Glycine max
Glyma.01G005000 0.5kb downstream 0.5kb downstream 2541 true Chr01: 464009-466549 Glycine max
Glyma.01G005000 0.5kb downstream 0.5kb downstream 500 false Chr01: 464009-464508 Glycine max
Glyma.01G005000 1.0kb upstream 1.0kb upstream 3041 true Chr01: 464509-467549 Glycine max
Glyma.01G005000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 466550-467549 Glycine max
Glyma.01G005000 1.0kb downstream 1.0kb downstream 3041 true Chr01: 463509-466549 Glycine max
Glyma.01G005000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 463509-464508 Glycine max
Glyma.01G005000 2.0kb upstream 2.0kb upstream 4041 true Chr01: 464509-468549 Glycine max
Glyma.01G005000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 466550-468549 Glycine max
Glyma.01G005000 2.0kb downstream 2.0kb downstream 4041 true Chr01: 462509-466549 Glycine max
Glyma.01G005000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 462509-464508 Glycine max
Glyma.01G005000 5.0kb upstream 5.0kb upstream 7041 true Chr01: 464509-471549 Glycine max
Glyma.01G005000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 466550-471549 Glycine max
Glyma.01G005000 5.0kb downstream 5.0kb downstream 7041 true Chr01: 459509-466549 Glycine max
Glyma.01G005000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 459509-464508 Glycine max
Glyma.01G005000 10.0kb upstream 10.0kb upstream 12041 true Chr01: 464509-476549 Glycine max
Glyma.01G005000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 466550-476549 Glycine max
Glyma.01G005000 10.0kb downstream 10.0kb downstream 12041 true Chr01: 454509-466549 Glycine max
Glyma.01G005000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 454509-464508 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122245089 5265 Fabidae Singleton cluster - no MSA
124051689 5270 Rosid View MSA
123751061 5271 Pentapetalae View MSA
122788502 5272 Eudicot View MSA
122046777 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.60216 0.0 15.7897   Low
cufflinks 34.9878 0.0 96.1354 High High
cufflinks 30.464 0.0 82.5707 High  
cufflinks 25.9768 0.0 70.0729 High  
cufflinks 32.2401 0.0 88.775 High  
cufflinks 13.7038 0.0 36.5958    
cufflinks 13.961 0.0 37.2708    
cufflinks 13.4759 0.0 36.0344    
cufflinks 26.87 0.0 72.707 High  
cufflinks 8.652     High  
cufflinks 35.901     High  
cufflinks 16.505     High  
cufflinks 2.411       Low
cufflinks 3.245       Low
cufflinks 90.165     High High
cufflinks 15.085     High  
cufflinks 14.55     High  
cufflinks 11.065     High  
cufflinks 39.094     High  
cufflinks 14.09     High  
cufflinks 42.979     High  
cufflinks 11.249     High  
cufflinks 18.647     High  
cufflinks 28.63     High  
cufflinks 14.072     High  
cufflinks 55.275     High High

0 Strain