Gene : Glyma.01G008400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10209:SF146 - 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED Genomic Order:  84
Name:  ? Glyma.01G008400 Secondary Identifier:  ? PAC:30541730
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ETHYL-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G008400 0.5kb upstream 0.5kb upstream 5621 true Chr01: 817547-823167 Glycine max
Glyma.01G008400 0.5kb upstream 0.5kb upstream 500 false Chr01: 817547-818046 Glycine max
Glyma.01G008400 0.5kb downstream 0.5kb downstream 5621 true Chr01: 818047-823667 Glycine max
Glyma.01G008400 0.5kb downstream 0.5kb downstream 500 false Chr01: 823168-823667 Glycine max
Glyma.01G008400 1.0kb upstream 1.0kb upstream 6121 true Chr01: 817047-823167 Glycine max
Glyma.01G008400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 817047-818046 Glycine max
Glyma.01G008400 1.0kb downstream 1.0kb downstream 6121 true Chr01: 818047-824167 Glycine max
Glyma.01G008400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 823168-824167 Glycine max
Glyma.01G008400 2.0kb upstream 2.0kb upstream 7121 true Chr01: 816047-823167 Glycine max
Glyma.01G008400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 816047-818046 Glycine max
Glyma.01G008400 2.0kb downstream 2.0kb downstream 7121 true Chr01: 818047-825167 Glycine max
Glyma.01G008400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 823168-825167 Glycine max
Glyma.01G008400 5.0kb upstream 5.0kb upstream 10121 true Chr01: 813047-823167 Glycine max
Glyma.01G008400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 813047-818046 Glycine max
Glyma.01G008400 5.0kb downstream 5.0kb downstream 10121 true Chr01: 818047-828167 Glycine max
Glyma.01G008400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 823168-828167 Glycine max
Glyma.01G008400 10.0kb upstream 10.0kb upstream 15121 true Chr01: 808047-823167 Glycine max
Glyma.01G008400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 808047-818046 Glycine max
Glyma.01G008400 10.0kb downstream 10.0kb downstream 15121 true Chr01: 818047-833167 Glycine max
Glyma.01G008400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 823168-833167 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302067 5265 Fabidae View MSA
124061088 5270 Rosid View MSA
123745959 5271 Pentapetalae View MSA
122787426 5272 Eudicot View MSA
122044176 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121345815 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.6042 0.0 66.8337    
cufflinks 5.3315 0.0 19.0332   Low
cufflinks 17.3855 0.0 59.307    
cufflinks 16.8789 0.0 57.6655    
cufflinks 10.3826 0.0 37.1772    
cufflinks 17.1509 0.0 58.5946    
cufflinks 13.0688 0.0 45.5061    
cufflinks 16.4221 0.0 56.1799    
cufflinks 16.2146 0.0 55.5343    
cufflinks 1.288        
cufflinks 1.661        
cufflinks 1.794        
cufflinks 0.99        
cufflinks 0.659       Low
cufflinks 1.067        
cufflinks 0.896        
cufflinks 2.433       High
cufflinks 2.719       High
cufflinks 0.759        
cufflinks 0.653       Low
cufflinks 1.948        
cufflinks 0.707       Low
cufflinks 0.617       Low
cufflinks 2.211       High
cufflinks 0.754        
cufflinks 1.493        

0 Strain