Gene : Glyma.01G006000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33172:SF2 - EMB Genomic Order:  60
Name:  ? Glyma.01G006000 Secondary Identifier:  ? PAC:30543896
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G006000 0.5kb upstream 0.5kb upstream 1834 true Chr01: 585472-587305 Glycine max
Glyma.01G006000 0.5kb upstream 0.5kb upstream 500 false Chr01: 585472-585971 Glycine max
Glyma.01G006000 0.5kb downstream 0.5kb downstream 1834 true Chr01: 585972-587805 Glycine max
Glyma.01G006000 0.5kb downstream 0.5kb downstream 500 false Chr01: 587306-587805 Glycine max
Glyma.01G006000 1.0kb upstream 1.0kb upstream 2334 true Chr01: 584972-587305 Glycine max
Glyma.01G006000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 584972-585971 Glycine max
Glyma.01G006000 1.0kb downstream 1.0kb downstream 2334 true Chr01: 585972-588305 Glycine max
Glyma.01G006000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 587306-588305 Glycine max
Glyma.01G006000 2.0kb upstream 2.0kb upstream 3334 true Chr01: 583972-587305 Glycine max
Glyma.01G006000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 583972-585971 Glycine max
Glyma.01G006000 2.0kb downstream 2.0kb downstream 3334 true Chr01: 585972-589305 Glycine max
Glyma.01G006000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 587306-589305 Glycine max
Glyma.01G006000 5.0kb upstream 5.0kb upstream 6334 true Chr01: 580972-587305 Glycine max
Glyma.01G006000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 580972-585971 Glycine max
Glyma.01G006000 5.0kb downstream 5.0kb downstream 6334 true Chr01: 585972-592305 Glycine max
Glyma.01G006000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 587306-592305 Glycine max
Glyma.01G006000 10.0kb upstream 10.0kb upstream 11334 true Chr01: 575972-587305 Glycine max
Glyma.01G006000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 575972-585971 Glycine max
Glyma.01G006000 10.0kb downstream 10.0kb downstream 11334 true Chr01: 585972-597305 Glycine max
Glyma.01G006000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 587306-597305 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311637 5265 Fabidae View MSA
124074077 5270 Rosid View MSA
123750402 5271 Pentapetalae View MSA
122795824 5272 Eudicot View MSA
122046186 5273 Angiosperm View MSA
121310570 5274 Embryophyte View MSA
123348021 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.8178 0.0 84.9623 High High
cufflinks 3.55283 0.0 11.8324    
cufflinks 42.6023 0.0 114.002 High High
cufflinks 4.1883 0.0 13.6471    
cufflinks 3.79937 0.0 12.6169    
cufflinks 8.30228 0.0 24.6086    
cufflinks 1.3006 0.0 4.74353   Low
cufflinks 1.0169 0.0 3.74877   Low
cufflinks 5.46409 0.0 17.154    
cufflinks 5.661       Low
cufflinks 259.081     High High
cufflinks 24.006     High  
cufflinks 7.789     High Low
cufflinks 6.761     High Low
cufflinks 163.006     High  
cufflinks 135.918     High  
cufflinks 20.665     High  
cufflinks 14.733     High  
cufflinks 10.531     High Low
cufflinks 227.979     High High
cufflinks 262.407     High High
cufflinks 84.179     High  
cufflinks 37.144     High  
cufflinks 154.164     High  
cufflinks 197.073     High  
cufflinks 225.563     High High

0 Strain