Gene : Glyma.01G012400 G. max Wm82.a2.v1
Defline:  (1 of 16) PF05542 - Protein of unknown function (DUF760) (DUF760) Genomic Order:  124
Name:  ? Glyma.01G012400 Secondary Identifier:  ? PAC:30542307
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G012400 0.5kb upstream 0.5kb upstream 4649 true Chr01: 1197320-1201968 Glycine max
Glyma.01G012400 0.5kb upstream 0.5kb upstream 500 false Chr01: 1197320-1197819 Glycine max
Glyma.01G012400 0.5kb downstream 0.5kb downstream 4649 true Chr01: 1197820-1202468 Glycine max
Glyma.01G012400 0.5kb downstream 0.5kb downstream 500 false Chr01: 1201969-1202468 Glycine max
Glyma.01G012400 1.0kb upstream 1.0kb upstream 5149 true Chr01: 1196820-1201968 Glycine max
Glyma.01G012400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1196820-1197819 Glycine max
Glyma.01G012400 1.0kb downstream 1.0kb downstream 5149 true Chr01: 1197820-1202968 Glycine max
Glyma.01G012400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1201969-1202968 Glycine max
Glyma.01G012400 2.0kb upstream 2.0kb upstream 6149 true Chr01: 1195820-1201968 Glycine max
Glyma.01G012400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1195820-1197819 Glycine max
Glyma.01G012400 2.0kb downstream 2.0kb downstream 6149 true Chr01: 1197820-1203968 Glycine max
Glyma.01G012400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1201969-1203968 Glycine max
Glyma.01G012400 5.0kb upstream 5.0kb upstream 9149 true Chr01: 1192820-1201968 Glycine max
Glyma.01G012400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1192820-1197819 Glycine max
Glyma.01G012400 5.0kb downstream 5.0kb downstream 9149 true Chr01: 1197820-1206968 Glycine max
Glyma.01G012400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1201969-1206968 Glycine max
Glyma.01G012400 10.0kb upstream 10.0kb upstream 14149 true Chr01: 1187820-1201968 Glycine max
Glyma.01G012400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1187820-1197819 Glycine max
Glyma.01G012400 10.0kb downstream 10.0kb downstream 14149 true Chr01: 1197820-1211968 Glycine max
Glyma.01G012400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1201969-1211968 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308163 5265 Fabidae View MSA
124061893 5270 Rosid View MSA
123739259 5271 Pentapetalae View MSA
122793011 5272 Eudicot View MSA
122047188 5273 Angiosperm View MSA
121310700 5274 Embryophyte View MSA
123428654 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9774 0.0 37.5035    
cufflinks 7.16023 0.0 20.072    
cufflinks 26.1306 0.0 70.0672 High High
cufflinks 7.28734 0.0 20.3852    
cufflinks 3.67412 0.0 11.2164   Low
cufflinks 9.04542 0.0 24.8371    
cufflinks 8.51971 0.0 23.5611    
cufflinks 7.40884 0.0 20.6823    
cufflinks 4.9921 0.0 14.5925    
cufflinks 1.345        
cufflinks 1.635        
cufflinks 6.522       High
cufflinks 0.884       Low
cufflinks 0.629       Low
cufflinks 0.687       Low
cufflinks 2.981        
cufflinks 2.289        
cufflinks 2.926        
cufflinks 2.509        
cufflinks 3.705        
cufflinks 1.001       Low
cufflinks 3.488        
cufflinks 2.811        
cufflinks 3.233        
cufflinks 3.186        
cufflinks 1.805        

0 Strain