Gene : Glyma.01G164100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11099 - VACUOLAR SORTING PROTEIN 35 Genomic Order:  1641
Name:  ? Glyma.01G164100 Secondary Identifier:  ? PAC:30544301
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G164100 0.5kb upstream 0.5kb upstream 9719 true Chr01: 50172429-50182147 Glycine max
Glyma.01G164100 0.5kb upstream 0.5kb upstream 500 false Chr01: 50172429-50172928 Glycine max
Glyma.01G164100 0.5kb downstream 0.5kb downstream 9719 true Chr01: 50172929-50182647 Glycine max
Glyma.01G164100 0.5kb downstream 0.5kb downstream 500 false Chr01: 50182148-50182647 Glycine max
Glyma.01G164100 1.0kb upstream 1.0kb upstream 10219 true Chr01: 50171929-50182147 Glycine max
Glyma.01G164100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50171929-50172928 Glycine max
Glyma.01G164100 1.0kb downstream 1.0kb downstream 10219 true Chr01: 50172929-50183147 Glycine max
Glyma.01G164100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50182148-50183147 Glycine max
Glyma.01G164100 2.0kb upstream 2.0kb upstream 11219 true Chr01: 50170929-50182147 Glycine max
Glyma.01G164100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50170929-50172928 Glycine max
Glyma.01G164100 2.0kb downstream 2.0kb downstream 11219 true Chr01: 50172929-50184147 Glycine max
Glyma.01G164100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50182148-50184147 Glycine max
Glyma.01G164100 5.0kb upstream 5.0kb upstream 14219 true Chr01: 50167929-50182147 Glycine max
Glyma.01G164100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50167929-50172928 Glycine max
Glyma.01G164100 5.0kb downstream 5.0kb downstream 14219 true Chr01: 50172929-50187147 Glycine max
Glyma.01G164100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50182148-50187147 Glycine max
Glyma.01G164100 10.0kb upstream 10.0kb upstream 19219 true Chr01: 50162929-50182147 Glycine max
Glyma.01G164100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50162929-50172928 Glycine max
Glyma.01G164100 10.0kb downstream 10.0kb downstream 19219 true Chr01: 50172929-50192147 Glycine max
Glyma.01G164100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50182148-50192147 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312645 5265 Fabidae View MSA
124070989 5270 Rosid View MSA
123744286 5271 Pentapetalae View MSA
122786661 5272 Eudicot View MSA
122044780 5273 Angiosperm View MSA
121345566 5274 Embryophyte View MSA
123426785 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.6012 0.0 47.6926    
cufflinks 15.8113 0.0 42.6023    
cufflinks 18.1979 0.0 49.4722   High
cufflinks 15.5234 0.0 41.8097   Low
cufflinks 18.0276 0.0 48.9229    
cufflinks 15.7184 0.0 42.3582    
cufflinks 16.9622 0.0 45.8381    
cufflinks 15.6676 0.0 42.2085   Low
cufflinks 18.4318 0.0 50.0907   High
cufflinks 5.11        
cufflinks 4.885       Low
cufflinks 6.325        
cufflinks 7.029       High
cufflinks 8.035     High High
cufflinks 5.643     High  
cufflinks 5.821        
cufflinks 4.277       Low
cufflinks 6.723        
cufflinks 7.532     High High
cufflinks 5.272        
cufflinks 5.412        
cufflinks 5.874        
cufflinks 5.153        
cufflinks 5.791        
cufflinks 5.2        
cufflinks 6.03        

0 Strain