Gene : Glyma.01G161700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15160//PTHR15160:SF6 - VON HIPPEL-LINDAU PROTEIN Genomic Order:  1617
Name:  ? Glyma.01G161700 Secondary Identifier:  ? PAC:30544955
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G161700 0.5kb upstream 0.5kb upstream 3585 true Chr01: 49988892-49992476 Glycine max
Glyma.01G161700 0.5kb upstream 0.5kb upstream 500 false Chr01: 49991977-49992476 Glycine max
Glyma.01G161700 0.5kb downstream 0.5kb downstream 3585 true Chr01: 49988392-49991976 Glycine max
Glyma.01G161700 0.5kb downstream 0.5kb downstream 500 false Chr01: 49988392-49988891 Glycine max
Glyma.01G161700 1.0kb upstream 1.0kb upstream 4085 true Chr01: 49988892-49992976 Glycine max
Glyma.01G161700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49991977-49992976 Glycine max
Glyma.01G161700 1.0kb downstream 1.0kb downstream 4085 true Chr01: 49987892-49991976 Glycine max
Glyma.01G161700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49987892-49988891 Glycine max
Glyma.01G161700 2.0kb upstream 2.0kb upstream 5085 true Chr01: 49988892-49993976 Glycine max
Glyma.01G161700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49991977-49993976 Glycine max
Glyma.01G161700 2.0kb downstream 2.0kb downstream 5085 true Chr01: 49986892-49991976 Glycine max
Glyma.01G161700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49986892-49988891 Glycine max
Glyma.01G161700 5.0kb upstream 5.0kb upstream 8085 true Chr01: 49988892-49996976 Glycine max
Glyma.01G161700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49991977-49996976 Glycine max
Glyma.01G161700 5.0kb downstream 5.0kb downstream 8085 true Chr01: 49983892-49991976 Glycine max
Glyma.01G161700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49983892-49988891 Glycine max
Glyma.01G161700 10.0kb upstream 10.0kb upstream 13085 true Chr01: 49988892-50001976 Glycine max
Glyma.01G161700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49991977-50001976 Glycine max
Glyma.01G161700 10.0kb downstream 10.0kb downstream 13085 true Chr01: 49978892-49991976 Glycine max
Glyma.01G161700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49978892-49988891 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301594 5265 Fabidae View MSA
124070862 5270 Rosid View MSA
123741334 5271 Pentapetalae View MSA
122787015 5272 Eudicot View MSA
122043801 5273 Angiosperm View MSA
121348227 5274 Embryophyte View MSA
123425976 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.77995 0.0 42.7556    
cufflinks 8.38921 0.0 40.6283    
cufflinks 18.6158 0.0 85.0341   High
cufflinks 18.2568 0.0 82.0931   High
cufflinks 8.61974 0.0 37.5996    
cufflinks 5.23875 0.0 23.8904   Low
cufflinks 8.45888 0.0 41.9232    
cufflinks 14.417 0.0 62.6089    
cufflinks 5.73457 0.0 28.5455   Low
cufflinks 0.877        
cufflinks 1.676        
cufflinks 0.923        
cufflinks 0.741        
cufflinks 0.719       Low
cufflinks 1.134        
cufflinks 0.96        
cufflinks 2.843       High
cufflinks 1.199        
cufflinks 0.77        
cufflinks 1.49        
cufflinks 1.604        
cufflinks 1.037        
cufflinks 0.653       Low
cufflinks 0.989        
cufflinks 1.196        
cufflinks 3.806       High

0 Strain