Gene : Glyma.01G169600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11945:SF173 - MADS-BOX FAMILY PROTEIN Genomic Order:  1696
Name:  ? Glyma.01G169600 Secondary Identifier:  ? PAC:30544442
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0 Pathways

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G169600 0.5kb upstream 0.5kb upstream 3128 true Chr01: 50706222-50709349 Glycine max
Glyma.01G169600 0.5kb upstream 0.5kb upstream 500 false Chr01: 50708850-50709349 Glycine max
Glyma.01G169600 0.5kb downstream 0.5kb downstream 3128 true Chr01: 50705722-50708849 Glycine max
Glyma.01G169600 0.5kb downstream 0.5kb downstream 500 false Chr01: 50705722-50706221 Glycine max
Glyma.01G169600 1.0kb upstream 1.0kb upstream 3628 true Chr01: 50706222-50709849 Glycine max
Glyma.01G169600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50708850-50709849 Glycine max
Glyma.01G169600 1.0kb downstream 1.0kb downstream 3628 true Chr01: 50705222-50708849 Glycine max
Glyma.01G169600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50705222-50706221 Glycine max
Glyma.01G169600 2.0kb upstream 2.0kb upstream 4628 true Chr01: 50706222-50710849 Glycine max
Glyma.01G169600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50708850-50710849 Glycine max
Glyma.01G169600 2.0kb downstream 2.0kb downstream 4628 true Chr01: 50704222-50708849 Glycine max
Glyma.01G169600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50704222-50706221 Glycine max
Glyma.01G169600 5.0kb upstream 5.0kb upstream 7628 true Chr01: 50706222-50713849 Glycine max
Glyma.01G169600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50708850-50713849 Glycine max
Glyma.01G169600 5.0kb downstream 5.0kb downstream 7628 true Chr01: 50701222-50708849 Glycine max
Glyma.01G169600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50701222-50706221 Glycine max
Glyma.01G169600 10.0kb upstream 10.0kb upstream 12628 true Chr01: 50706222-50718849 Glycine max
Glyma.01G169600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50708850-50718849 Glycine max
Glyma.01G169600 10.0kb downstream 10.0kb downstream 12628 true Chr01: 50696222-50708849 Glycine max
Glyma.01G169600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50696222-50706221 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310470 5265 Fabidae View MSA
124071528 5270 Rosid View MSA
123747185 5271 Pentapetalae View MSA
122794431 5272 Eudicot View MSA
122047951 5273 Angiosperm View MSA
121310821 5274 Embryophyte View MSA
123348212 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.558333 0.0 2.76822    
cufflinks 23.414 0.0 89.1033 High High
cufflinks 12.5159 0.0 50.4247   High
cufflinks 0.0302297 0.0 0.135716 Low Low
cufflinks 0.0948855 0.0 0.381582 Low  
cufflinks 11.4568 0.0 47.3769   High
cufflinks 0.0822855 0.0 0.333215 Low  
cufflinks 0.0516117 0.0 0.21935 Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.961     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.024     Low  
cufflinks 0.004     Low  
cufflinks 35.252     High High
cufflinks 0.072     Low  
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  
cufflinks 0.033     Low  
cufflinks 0.005     Low  
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain