Gene : Glyma.01G186600 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR21493//PTHR21493:SF142 - CGI-141-RELATED/LIPASE CONTAINING PROTEIN Genomic Order:  1866
Name:  ? Glyma.01G186600 Secondary Identifier:  ? PAC:30544342
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPAS-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G186600 0.5kb upstream 0.5kb upstream 7272 true Chr01: 52185307-52192578 Glycine max
Glyma.01G186600 0.5kb upstream 0.5kb upstream 500 false Chr01: 52192079-52192578 Glycine max
Glyma.01G186600 0.5kb downstream 0.5kb downstream 7272 true Chr01: 52184807-52192078 Glycine max
Glyma.01G186600 0.5kb downstream 0.5kb downstream 500 false Chr01: 52184807-52185306 Glycine max
Glyma.01G186600 1.0kb upstream 1.0kb upstream 7772 true Chr01: 52185307-52193078 Glycine max
Glyma.01G186600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 52192079-52193078 Glycine max
Glyma.01G186600 1.0kb downstream 1.0kb downstream 7772 true Chr01: 52184307-52192078 Glycine max
Glyma.01G186600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 52184307-52185306 Glycine max
Glyma.01G186600 2.0kb upstream 2.0kb upstream 8772 true Chr01: 52185307-52194078 Glycine max
Glyma.01G186600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 52192079-52194078 Glycine max
Glyma.01G186600 2.0kb downstream 2.0kb downstream 8772 true Chr01: 52183307-52192078 Glycine max
Glyma.01G186600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 52183307-52185306 Glycine max
Glyma.01G186600 5.0kb upstream 5.0kb upstream 11772 true Chr01: 52185307-52197078 Glycine max
Glyma.01G186600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 52192079-52197078 Glycine max
Glyma.01G186600 5.0kb downstream 5.0kb downstream 11772 true Chr01: 52180307-52192078 Glycine max
Glyma.01G186600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 52180307-52185306 Glycine max
Glyma.01G186600 10.0kb upstream 10.0kb upstream 16772 true Chr01: 52185307-52202078 Glycine max
Glyma.01G186600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 52192079-52202078 Glycine max
Glyma.01G186600 10.0kb downstream 10.0kb downstream 16772 true Chr01: 52175307-52192078 Glycine max
Glyma.01G186600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 52175307-52185306 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312329 5265 Fabidae View MSA
124069453 5270 Rosid View MSA
123746073 5271 Pentapetalae View MSA
122791572 5272 Eudicot View MSA
122051132 5273 Angiosperm View MSA
121349994 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.542 0.0 60.2125 High Low
cufflinks 18.8403 0.0 50.2649   Low
cufflinks 80.4043 0.0 240.416 High  
cufflinks 137.246 0.0 451.121 High  
cufflinks 66.0143 0.0 191.279 High  
cufflinks 237.813 0.0 894.056 High High
cufflinks 33.9792 0.0 92.1785 High  
cufflinks 23.0345 0.0 61.5547 High  
cufflinks 97.8194 0.0 301.193 High  
cufflinks 7.952     High  
cufflinks 1.756       Low
cufflinks 36.593     High High
cufflinks 17.455     High  
cufflinks 7.616     High  
cufflinks 4.128        
cufflinks 11.78     High  
cufflinks 14.309     High  
cufflinks 42.206     High High
cufflinks 14.117     High  
cufflinks 8.064     High  
cufflinks 3.287       Low
cufflinks 14.24     High  
cufflinks 22.932     High  
cufflinks 2.234       Low
cufflinks 12.527     High  
cufflinks 9.688     High  

0 Strain