Gene : Glyma.01G183800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13391 - TUBULIN-RELATED PROTEIN Genomic Order:  1838
Name:  ? Glyma.01G183800 Secondary Identifier:  ? PAC:30542190
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G183800 0.5kb upstream 0.5kb upstream 7049 true Chr01: 51906679-51913727 Glycine max
Glyma.01G183800 0.5kb upstream 0.5kb upstream 500 false Chr01: 51906679-51907178 Glycine max
Glyma.01G183800 0.5kb downstream 0.5kb downstream 7049 true Chr01: 51907179-51914227 Glycine max
Glyma.01G183800 0.5kb downstream 0.5kb downstream 500 false Chr01: 51913728-51914227 Glycine max
Glyma.01G183800 1.0kb upstream 1.0kb upstream 7549 true Chr01: 51906179-51913727 Glycine max
Glyma.01G183800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 51906179-51907178 Glycine max
Glyma.01G183800 1.0kb downstream 1.0kb downstream 7549 true Chr01: 51907179-51914727 Glycine max
Glyma.01G183800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 51913728-51914727 Glycine max
Glyma.01G183800 2.0kb upstream 2.0kb upstream 8549 true Chr01: 51905179-51913727 Glycine max
Glyma.01G183800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51905179-51907178 Glycine max
Glyma.01G183800 2.0kb downstream 2.0kb downstream 8549 true Chr01: 51907179-51915727 Glycine max
Glyma.01G183800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 51913728-51915727 Glycine max
Glyma.01G183800 5.0kb upstream 5.0kb upstream 11549 true Chr01: 51902179-51913727 Glycine max
Glyma.01G183800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 51902179-51907178 Glycine max
Glyma.01G183800 5.0kb downstream 5.0kb downstream 11549 true Chr01: 51907179-51918727 Glycine max
Glyma.01G183800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 51913728-51918727 Glycine max
Glyma.01G183800 10.0kb upstream 10.0kb upstream 16549 true Chr01: 51897179-51913727 Glycine max
Glyma.01G183800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 51897179-51907178 Glycine max
Glyma.01G183800 10.0kb downstream 10.0kb downstream 16549 true Chr01: 51907179-51923727 Glycine max
Glyma.01G183800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 51913728-51923727 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306217 5265 Fabidae View MSA
124066645 5270 Rosid View MSA
123741201 5271 Pentapetalae View MSA
122788298 5272 Eudicot View MSA
122047686 5273 Angiosperm View MSA
121346251 5274 Embryophyte View MSA
123424627 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.00873 0.0 14.1112   High
cufflinks 3.37955 0.0 9.98263    
cufflinks 4.39018 0.0 12.5098    
cufflinks 2.99475 0.0 8.98157    
cufflinks 3.78174 0.0 11.0052    
cufflinks 2.63615 0.0 8.04862   Low
cufflinks 6.36323 0.0 17.5395   High
cufflinks 3.18954 0.0 9.48983    
cufflinks 3.26443 0.0 9.67298    
cufflinks 0.728        
cufflinks 0.611       Low
cufflinks 1.685       High
cufflinks 1.445        
cufflinks 1.788       High
cufflinks 0.637       Low
cufflinks 1.095        
cufflinks 0.822        
cufflinks 1.326        
cufflinks 1.51       High
cufflinks 1.196        
cufflinks 0.593       Low
cufflinks 1.261        
cufflinks 1.213        
cufflinks 0.642       Low
cufflinks 1.263        
cufflinks 0.887        

0 Strain