Gene : Glyma.01G204000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12395 - DOM-3 RELATED Genomic Order:  2040
Name:  ? Glyma.01G204000 Secondary Identifier:  ? PAC:30544952
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G204000 0.5kb upstream 0.5kb upstream 5470 true Chr01: 53690453-53695922 Glycine max
Glyma.01G204000 0.5kb upstream 0.5kb upstream 500 false Chr01: 53695423-53695922 Glycine max
Glyma.01G204000 0.5kb downstream 0.5kb downstream 5470 true Chr01: 53689953-53695422 Glycine max
Glyma.01G204000 0.5kb downstream 0.5kb downstream 500 false Chr01: 53689953-53690452 Glycine max
Glyma.01G204000 1.0kb upstream 1.0kb upstream 5970 true Chr01: 53690453-53696422 Glycine max
Glyma.01G204000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 53695423-53696422 Glycine max
Glyma.01G204000 1.0kb downstream 1.0kb downstream 5970 true Chr01: 53689453-53695422 Glycine max
Glyma.01G204000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 53689453-53690452 Glycine max
Glyma.01G204000 2.0kb upstream 2.0kb upstream 6970 true Chr01: 53690453-53697422 Glycine max
Glyma.01G204000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 53695423-53697422 Glycine max
Glyma.01G204000 2.0kb downstream 2.0kb downstream 6970 true Chr01: 53688453-53695422 Glycine max
Glyma.01G204000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 53688453-53690452 Glycine max
Glyma.01G204000 5.0kb upstream 5.0kb upstream 9970 true Chr01: 53690453-53700422 Glycine max
Glyma.01G204000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 53695423-53700422 Glycine max
Glyma.01G204000 5.0kb downstream 5.0kb downstream 9970 true Chr01: 53685453-53695422 Glycine max
Glyma.01G204000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 53685453-53690452 Glycine max
Glyma.01G204000 10.0kb upstream 10.0kb upstream 14970 true Chr01: 53690453-53705422 Glycine max
Glyma.01G204000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 53695423-53705422 Glycine max
Glyma.01G204000 10.0kb downstream 10.0kb downstream 14970 true Chr01: 53680453-53695422 Glycine max
Glyma.01G204000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 53680453-53690452 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306267 5265 Fabidae View MSA
124073071 5270 Rosid View MSA
123741994 5271 Pentapetalae View MSA
122794748 5272 Eudicot View MSA
122048232 5273 Angiosperm View MSA
121348274 5274 Embryophyte View MSA
123425887 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3319 0.0 39.6329    
cufflinks 8.99874 0.0 36.4025   Low
cufflinks 9.73294 0.0 38.6442    
cufflinks 11.8318 0.0 41.428   High
cufflinks 10.8681 0.0 38.2755    
cufflinks 9.00395 0.0 35.9035   Low
cufflinks 10.4193 0.0 43.5524    
cufflinks 10.1268 0.0 40.4502    
cufflinks 10.9101 0.0 43.4827    
cufflinks 1.424        
cufflinks 2.125       High
cufflinks 1.438        
cufflinks 1.225       Low
cufflinks 1.391        
cufflinks 2.206       High
cufflinks 1.24       Low
cufflinks 1.915       High
cufflinks 1.6        
cufflinks 1.617        
cufflinks 1.335        
cufflinks 1.626        
cufflinks 1.309        
cufflinks 1.71        
cufflinks 1.702        
cufflinks 1.209       Low
cufflinks 1.599        

0 Strain