Gene : Glyma.01G208300 G. max Wm82.a2.v1
Defline:  (1 of 21) PF04784//PF14389 - Protein of unknown function, DUF547 (DUF547) // Leucine-zipper of ternary complex factor MIP1 (Lzipper-MIP1) Genomic Order:  2083
Name:  ? Glyma.01G208300 Secondary Identifier:  ? PAC:30545103
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G208300 0.5kb upstream 0.5kb upstream 8983 true Chr01: 54000637-54009619 Glycine max
Glyma.01G208300 0.5kb upstream 0.5kb upstream 500 false Chr01: 54000637-54001136 Glycine max
Glyma.01G208300 0.5kb downstream 0.5kb downstream 8983 true Chr01: 54001137-54010119 Glycine max
Glyma.01G208300 0.5kb downstream 0.5kb downstream 500 false Chr01: 54009620-54010119 Glycine max
Glyma.01G208300 1.0kb upstream 1.0kb upstream 9483 true Chr01: 54000137-54009619 Glycine max
Glyma.01G208300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54000137-54001136 Glycine max
Glyma.01G208300 1.0kb downstream 1.0kb downstream 9483 true Chr01: 54001137-54010619 Glycine max
Glyma.01G208300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54009620-54010619 Glycine max
Glyma.01G208300 2.0kb upstream 2.0kb upstream 10483 true Chr01: 53999137-54009619 Glycine max
Glyma.01G208300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 53999137-54001136 Glycine max
Glyma.01G208300 2.0kb downstream 2.0kb downstream 10483 true Chr01: 54001137-54011619 Glycine max
Glyma.01G208300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54009620-54011619 Glycine max
Glyma.01G208300 5.0kb upstream 5.0kb upstream 13483 true Chr01: 53996137-54009619 Glycine max
Glyma.01G208300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 53996137-54001136 Glycine max
Glyma.01G208300 5.0kb downstream 5.0kb downstream 13483 true Chr01: 54001137-54014619 Glycine max
Glyma.01G208300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54009620-54014619 Glycine max
Glyma.01G208300 10.0kb upstream 10.0kb upstream 18483 true Chr01: 53991137-54009619 Glycine max
Glyma.01G208300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 53991137-54001136 Glycine max
Glyma.01G208300 10.0kb downstream 10.0kb downstream 18483 true Chr01: 54001137-54019619 Glycine max
Glyma.01G208300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54009620-54019619 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311957 5265 Fabidae View MSA
124069316 5270 Rosid View MSA
123741227 5271 Pentapetalae View MSA
122791829 5272 Eudicot View MSA
122043072 5273 Angiosperm View MSA
121350596 5274 Embryophyte View MSA
123381815 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.116172 0.0 0.45224 Low Low
cufflinks 3.08546 0.0 11.4573   High
cufflinks 0.879654 0.0 3.55473    
cufflinks 2.20442 0.0 6.893    
cufflinks 0.36736 0.0 1.7511    
cufflinks 0.596166 0.0 2.62796    
cufflinks 2.11342 0.0 6.84946    
cufflinks 0.438752 0.0 1.9935    
cufflinks 0.941976 0.0 5.01869    
cufflinks 0.101        
cufflinks 0.066        
cufflinks 0.515       High
cufflinks 0.089     Low  
cufflinks 0.086        
cufflinks 0.095        
cufflinks 0.22        
cufflinks 0.021     Low Low
cufflinks 1.266       High
cufflinks 0.638       High
cufflinks 0.165        
cufflinks 0.049     Low  
cufflinks 0.14        
cufflinks 0.118        
cufflinks 0.059     Low  
cufflinks 0.148        
cufflinks 0.067        

0 Strain