Gene : Glyma.18G231300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31500:SF10 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  2313
Name:  ? Glyma.18G231300 Secondary Identifier:  ? PAC:30558497
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G231300 0.5kb upstream 0.5kb upstream 8468 true Chr18: 51979095-51987562 Glycine max
Glyma.18G231300 0.5kb upstream 0.5kb upstream 500 false Chr18: 51987063-51987562 Glycine max
Glyma.18G231300 0.5kb downstream 0.5kb downstream 8468 true Chr18: 51978595-51987062 Glycine max
Glyma.18G231300 0.5kb downstream 0.5kb downstream 500 false Chr18: 51978595-51979094 Glycine max
Glyma.18G231300 1.0kb upstream 1.0kb upstream 8968 true Chr18: 51979095-51988062 Glycine max
Glyma.18G231300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 51987063-51988062 Glycine max
Glyma.18G231300 1.0kb downstream 1.0kb downstream 8968 true Chr18: 51978095-51987062 Glycine max
Glyma.18G231300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 51978095-51979094 Glycine max
Glyma.18G231300 2.0kb upstream 2.0kb upstream 9968 true Chr18: 51979095-51989062 Glycine max
Glyma.18G231300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 51987063-51989062 Glycine max
Glyma.18G231300 2.0kb downstream 2.0kb downstream 9968 true Chr18: 51977095-51987062 Glycine max
Glyma.18G231300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 51977095-51979094 Glycine max
Glyma.18G231300 5.0kb upstream 5.0kb upstream 12968 true Chr18: 51979095-51992062 Glycine max
Glyma.18G231300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 51987063-51992062 Glycine max
Glyma.18G231300 5.0kb downstream 5.0kb downstream 12968 true Chr18: 51974095-51987062 Glycine max
Glyma.18G231300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 51974095-51979094 Glycine max
Glyma.18G231300 10.0kb upstream 10.0kb upstream 17968 true Chr18: 51979095-51997062 Glycine max
Glyma.18G231300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 51987063-51997062 Glycine max
Glyma.18G231300 10.0kb downstream 10.0kb downstream 17968 true Chr18: 51969095-51987062 Glycine max
Glyma.18G231300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 51969095-51979094 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041209 5273 Angiosperm View MSA
122311157 5265 Fabidae View MSA
124064168 5270 Rosid View MSA
123741988 5271 Pentapetalae View MSA
122789787 5272 Eudicot View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6016 0.0 43.3084    
cufflinks 30.3573 0.0 110.423 High High
cufflinks 11.3254 0.0 44.1977    
cufflinks 5.79762 0.0 25.3652    
cufflinks 1.53782 0.0 7.64071   Low
cufflinks 1.53696 0.0 7.56401   Low
cufflinks 7.54739 0.0 30.7386    
cufflinks 12.474 0.0 51.2182    
cufflinks 0.860206 0.0 4.86321   Low
cufflinks 1.071        
cufflinks 0.01     Low Low
cufflinks 0.461        
cufflinks 0.033     Low  
cufflinks 0.071     Low  
cufflinks 0.002     Low Low
cufflinks 2.0       High
cufflinks 0.023     Low  
cufflinks 0.588        
cufflinks 1.319        
cufflinks 3.124       High
cufflinks 0.013     Low Low
cufflinks 2.443       High
cufflinks 1.596        
cufflinks 0.014     Low Low
cufflinks 2.445       High
cufflinks 0.022     Low  

0 Strain