Gene : Glyma.01G077300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10072//PTHR10072:SF43 - IRON-SULFUR CLUSTER ASSEMBLY PROTEIN Genomic Order:  773
Name:  ? Glyma.01G077300 Secondary Identifier:  ? PAC:30541527
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G077300 0.5kb upstream 0.5kb upstream 18833 true Chr01: 18837883-18856715 Glycine max
Glyma.01G077300 0.5kb upstream 0.5kb upstream 500 false Chr01: 18837883-18838382 Glycine max
Glyma.01G077300 0.5kb downstream 0.5kb downstream 18833 true Chr01: 18838383-18857215 Glycine max
Glyma.01G077300 0.5kb downstream 0.5kb downstream 500 false Chr01: 18856716-18857215 Glycine max
Glyma.01G077300 1.0kb upstream 1.0kb upstream 19333 true Chr01: 18837383-18856715 Glycine max
Glyma.01G077300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 18837383-18838382 Glycine max
Glyma.01G077300 1.0kb downstream 1.0kb downstream 19333 true Chr01: 18838383-18857715 Glycine max
Glyma.01G077300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 18856716-18857715 Glycine max
Glyma.01G077300 2.0kb upstream 2.0kb upstream 20333 true Chr01: 18836383-18856715 Glycine max
Glyma.01G077300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 18836383-18838382 Glycine max
Glyma.01G077300 2.0kb downstream 2.0kb downstream 20333 true Chr01: 18838383-18858715 Glycine max
Glyma.01G077300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 18856716-18858715 Glycine max
Glyma.01G077300 5.0kb upstream 5.0kb upstream 23333 true Chr01: 18833383-18856715 Glycine max
Glyma.01G077300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 18833383-18838382 Glycine max
Glyma.01G077300 5.0kb downstream 5.0kb downstream 23333 true Chr01: 18838383-18861715 Glycine max
Glyma.01G077300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 18856716-18861715 Glycine max
Glyma.01G077300 10.0kb upstream 10.0kb upstream 28333 true Chr01: 18828383-18856715 Glycine max
Glyma.01G077300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 18828383-18838382 Glycine max
Glyma.01G077300 10.0kb downstream 10.0kb downstream 28333 true Chr01: 18838383-18866715 Glycine max
Glyma.01G077300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 18856716-18866715 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306107 5265 Fabidae View MSA
124068563 5270 Rosid View MSA
123740519 5271 Pentapetalae View MSA
122789049 5272 Eudicot View MSA
122045201 5273 Angiosperm View MSA
121346515 5274 Embryophyte View MSA
123424374 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.7168 0.0 67.9813   High
cufflinks 8.11428 0.0 29.9498    
cufflinks 9.37082 0.0 38.563    
cufflinks 5.69682 0.0 25.5194    
cufflinks 4.1023 0.0 18.6586    
cufflinks 2.28265 0.0 10.6278   Low
cufflinks 3.45955 0.0 16.294    
cufflinks 7.14867 0.0 30.9991    
cufflinks 3.25721 0.0 15.9724    
cufflinks 0.331        
cufflinks 0.048     Low Low
cufflinks 0.386        
cufflinks 0.169        
cufflinks 0.178        
cufflinks 0.093       Low
cufflinks 0.658       High
cufflinks 0.144        
cufflinks 0.396        
cufflinks 0.479        
cufflinks 0.655       High
cufflinks 0.078       Low
cufflinks 0.705       High
cufflinks 0.717       High
cufflinks 0.074       Low
cufflinks 0.651       High
cufflinks 0.083       Low

0 Strain