Gene : Glyma.01G064900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR33914:SF2 - 18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-RELATED PROTEIN Genomic Order:  649
Name:  ? Glyma.01G064900 Secondary Identifier:  ? PAC:30544356
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G064900 0.5kb upstream 0.5kb upstream 5926 true Chr01: 9962320-9968245 Glycine max
Glyma.01G064900 0.5kb upstream 0.5kb upstream 500 false Chr01: 9962320-9962819 Glycine max
Glyma.01G064900 0.5kb downstream 0.5kb downstream 5926 true Chr01: 9962820-9968745 Glycine max
Glyma.01G064900 0.5kb downstream 0.5kb downstream 500 false Chr01: 9968246-9968745 Glycine max
Glyma.01G064900 1.0kb upstream 1.0kb upstream 6426 true Chr01: 9961820-9968245 Glycine max
Glyma.01G064900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 9961820-9962819 Glycine max
Glyma.01G064900 1.0kb downstream 1.0kb downstream 6426 true Chr01: 9962820-9969245 Glycine max
Glyma.01G064900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 9968246-9969245 Glycine max
Glyma.01G064900 2.0kb upstream 2.0kb upstream 7426 true Chr01: 9960820-9968245 Glycine max
Glyma.01G064900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 9960820-9962819 Glycine max
Glyma.01G064900 2.0kb downstream 2.0kb downstream 7426 true Chr01: 9962820-9970245 Glycine max
Glyma.01G064900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 9968246-9970245 Glycine max
Glyma.01G064900 5.0kb upstream 5.0kb upstream 10426 true Chr01: 9957820-9968245 Glycine max
Glyma.01G064900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 9957820-9962819 Glycine max
Glyma.01G064900 5.0kb downstream 5.0kb downstream 10426 true Chr01: 9962820-9973245 Glycine max
Glyma.01G064900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 9968246-9973245 Glycine max
Glyma.01G064900 10.0kb upstream 10.0kb upstream 15426 true Chr01: 9952820-9968245 Glycine max
Glyma.01G064900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 9952820-9962819 Glycine max
Glyma.01G064900 10.0kb downstream 10.0kb downstream 15426 true Chr01: 9962820-9978245 Glycine max
Glyma.01G064900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 9968246-9978245 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314778 5265 Fabidae View MSA
124072821 5270 Rosid View MSA
123747257 5271 Pentapetalae View MSA
122794578 5272 Eudicot View MSA
122043601 5273 Angiosperm View MSA
121349006 5274 Embryophyte View MSA
123381122 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.88538 0.0 35.4638    
cufflinks 6.3853 0.0 30.3758    
cufflinks 5.19114 0.0 23.8126    
cufflinks 2.55781 0.0 15.3629   Low
cufflinks 4.61932 0.0 22.4558    
cufflinks 19.5753 0.0 87.2705   High
cufflinks 2.17071 0.0 14.8869   Low
cufflinks 6.38628 0.0 28.7816    
cufflinks 10.4027 0.0 46.1135    
cufflinks 0.49        
cufflinks 1.377       High
cufflinks 0.427        
cufflinks 0.402        
cufflinks 0.18       Low
cufflinks 2.008       High
cufflinks 0.52        
cufflinks 0.619        
cufflinks 0.486        
cufflinks 0.503        
cufflinks 0.526        
cufflinks 1.837       High
cufflinks 0.601        
cufflinks 0.524        
cufflinks 1.679       High
cufflinks 0.461        
cufflinks 2.128       High

0 Strain