Gene : Glyma.01G081500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10621//PTHR10621:SF12 - UV EXCISION REPAIR PROTEIN RAD23 Genomic Order:  815
Name:  ? Glyma.01G081500 Secondary Identifier:  ? PAC:30544367
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G081500 0.5kb upstream 0.5kb upstream 9959 true Chr01: 23599936-23609894 Glycine max
Glyma.01G081500 0.5kb upstream 0.5kb upstream 500 false Chr01: 23599936-23600435 Glycine max
Glyma.01G081500 0.5kb downstream 0.5kb downstream 9959 true Chr01: 23600436-23610394 Glycine max
Glyma.01G081500 0.5kb downstream 0.5kb downstream 500 false Chr01: 23609895-23610394 Glycine max
Glyma.01G081500 1.0kb upstream 1.0kb upstream 10459 true Chr01: 23599436-23609894 Glycine max
Glyma.01G081500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 23599436-23600435 Glycine max
Glyma.01G081500 1.0kb downstream 1.0kb downstream 10459 true Chr01: 23600436-23610894 Glycine max
Glyma.01G081500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 23609895-23610894 Glycine max
Glyma.01G081500 2.0kb upstream 2.0kb upstream 11459 true Chr01: 23598436-23609894 Glycine max
Glyma.01G081500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 23598436-23600435 Glycine max
Glyma.01G081500 2.0kb downstream 2.0kb downstream 11459 true Chr01: 23600436-23611894 Glycine max
Glyma.01G081500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 23609895-23611894 Glycine max
Glyma.01G081500 5.0kb upstream 5.0kb upstream 14459 true Chr01: 23595436-23609894 Glycine max
Glyma.01G081500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 23595436-23600435 Glycine max
Glyma.01G081500 5.0kb downstream 5.0kb downstream 14459 true Chr01: 23600436-23614894 Glycine max
Glyma.01G081500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 23609895-23614894 Glycine max
Glyma.01G081500 10.0kb upstream 10.0kb upstream 19459 true Chr01: 23590436-23609894 Glycine max
Glyma.01G081500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 23590436-23600435 Glycine max
Glyma.01G081500 10.0kb downstream 10.0kb downstream 19459 true Chr01: 23600436-23619894 Glycine max
Glyma.01G081500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 23609895-23619894 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040911 5273 Angiosperm View MSA
122309404 5265 Fabidae View MSA
124061978 5270 Rosid View MSA
123736504 5271 Pentapetalae View MSA
122787573 5272 Eudicot View MSA
121350140 5274 Embryophyte View MSA
123423951 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.5211 0.0 123.053 High Low
cufflinks 51.354 0.0 143.956 High  
cufflinks 55.8941 0.0 158.468 High  
cufflinks 47.7899 0.0 133.186 High  
cufflinks 56.9359 0.0 161.911 High  
cufflinks 75.9481 0.0 224.154 High High
cufflinks 61.4448 0.0 176.162 High  
cufflinks 53.4213 0.0 150.703 High  
cufflinks 57.3976 0.0 163.162 High  
cufflinks 5.386        
cufflinks 4.537       Low
cufflinks 5.736        
cufflinks 8.104     High High
cufflinks 7.505     High High
cufflinks 4.958       Low
cufflinks 6.513        
cufflinks 6.377     High  
cufflinks 5.18        
cufflinks 6.673        
cufflinks 7.176     High High
cufflinks 4.881       Low
cufflinks 6.494        
cufflinks 6.121        
cufflinks 5.842        
cufflinks 6.146        
cufflinks 6.482     High  

0 Strain