Gene : Glyma.01G086800 G. max Wm82.a2.v1
Defline:  (1 of 17) PTHR10593//PTHR10593:SF27 - SERINE/THREONINE-PROTEIN KINASE RIO Genomic Order:  868
Name:  ? Glyma.01G086800 Secondary Identifier:  ? PAC:30542450
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G086800 0.5kb upstream 0.5kb upstream 2506 true Chr01: 26113513-26116018 Glycine max
Glyma.01G086800 0.5kb upstream 0.5kb upstream 500 false Chr01: 26113513-26114012 Glycine max
Glyma.01G086800 0.5kb downstream 0.5kb downstream 2506 true Chr01: 26114013-26116518 Glycine max
Glyma.01G086800 0.5kb downstream 0.5kb downstream 500 false Chr01: 26116019-26116518 Glycine max
Glyma.01G086800 1.0kb upstream 1.0kb upstream 3006 true Chr01: 26113013-26116018 Glycine max
Glyma.01G086800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 26113013-26114012 Glycine max
Glyma.01G086800 1.0kb downstream 1.0kb downstream 3006 true Chr01: 26114013-26117018 Glycine max
Glyma.01G086800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 26116019-26117018 Glycine max
Glyma.01G086800 2.0kb upstream 2.0kb upstream 4006 true Chr01: 26112013-26116018 Glycine max
Glyma.01G086800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 26112013-26114012 Glycine max
Glyma.01G086800 2.0kb downstream 2.0kb downstream 4006 true Chr01: 26114013-26118018 Glycine max
Glyma.01G086800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 26116019-26118018 Glycine max
Glyma.01G086800 5.0kb upstream 5.0kb upstream 7006 true Chr01: 26109013-26116018 Glycine max
Glyma.01G086800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 26109013-26114012 Glycine max
Glyma.01G086800 5.0kb downstream 5.0kb downstream 7006 true Chr01: 26114013-26121018 Glycine max
Glyma.01G086800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 26116019-26121018 Glycine max
Glyma.01G086800 10.0kb upstream 10.0kb upstream 12006 true Chr01: 26104013-26116018 Glycine max
Glyma.01G086800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 26104013-26114012 Glycine max
Glyma.01G086800 10.0kb downstream 10.0kb downstream 12006 true Chr01: 26114013-26126018 Glycine max
Glyma.01G086800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 26116019-26126018 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309125 5265 Fabidae View MSA
124071886 5270 Rosid View MSA
123745517 5271 Pentapetalae View MSA
122795224 5272 Eudicot View MSA
122047966 5273 Angiosperm View MSA
121348294 5274 Embryophyte View MSA
123428588 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0593823 0.0 0.245792 Low Low
cufflinks 0.860456 0.0 3.1756    
cufflinks 0.752367 0.0 2.79973    
cufflinks 0.470148 0.0 1.78319    
cufflinks 1.24386 0.0 4.46964    
cufflinks 0.0736083 0.0 0.30095 Low Low
cufflinks 2.33759 0.0 7.95459   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.224       High
cufflinks 0.017     Low  
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.015     Low  
cufflinks 0.607       High
cufflinks 0.724       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.009     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain