Gene : Glyma.01G103000 G. max Wm82.a2.v1
Defline:  (1 of 87) PF14223 - gag-polypeptide of LTR copia-type (UBN2) Genomic Order:  1030
Name:  ? Glyma.01G103000 Secondary Identifier:  ? PAC:30544389
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G103000 0.5kb upstream 0.5kb upstream 1181 true Chr01: 34364077-34365257 Glycine max
Glyma.01G103000 0.5kb upstream 0.5kb upstream 500 false Chr01: 34364077-34364576 Glycine max
Glyma.01G103000 0.5kb downstream 0.5kb downstream 1181 true Chr01: 34364577-34365757 Glycine max
Glyma.01G103000 0.5kb downstream 0.5kb downstream 500 false Chr01: 34365258-34365757 Glycine max
Glyma.01G103000 1.0kb upstream 1.0kb upstream 1681 true Chr01: 34363577-34365257 Glycine max
Glyma.01G103000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 34363577-34364576 Glycine max
Glyma.01G103000 1.0kb downstream 1.0kb downstream 1681 true Chr01: 34364577-34366257 Glycine max
Glyma.01G103000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 34365258-34366257 Glycine max
Glyma.01G103000 2.0kb upstream 2.0kb upstream 2681 true Chr01: 34362577-34365257 Glycine max
Glyma.01G103000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 34362577-34364576 Glycine max
Glyma.01G103000 2.0kb downstream 2.0kb downstream 2681 true Chr01: 34364577-34367257 Glycine max
Glyma.01G103000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 34365258-34367257 Glycine max
Glyma.01G103000 5.0kb upstream 5.0kb upstream 5681 true Chr01: 34359577-34365257 Glycine max
Glyma.01G103000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 34359577-34364576 Glycine max
Glyma.01G103000 5.0kb downstream 5.0kb downstream 5681 true Chr01: 34364577-34370257 Glycine max
Glyma.01G103000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 34365258-34370257 Glycine max
Glyma.01G103000 10.0kb upstream 10.0kb upstream 10681 true Chr01: 34354577-34365257 Glycine max
Glyma.01G103000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 34354577-34364576 Glycine max
Glyma.01G103000 10.0kb downstream 10.0kb downstream 10681 true Chr01: 34364577-34375257 Glycine max
Glyma.01G103000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 34365258-34375257 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309396 5265 Fabidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain